Jatropha Genome Database
- JcCB0454891.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0454891.10 + phase: 0 /pseudo
(785 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29656.m000473 cell cycle checkpoint protein rad17, putative 476 e-133
>29656.m000473 cell cycle checkpoint protein rad17, putative
Length = 1320
Score = 476 bits (240), Expect = e-133
Identities = 541/640 (84%), Gaps = 6/640 (0%)
Strand = Plus / Plus
Query: 55 tccaagttggatgaatttgtgaactttattgagaaagtaaggaagtatggatcgattcct 114
|||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||
Sbjct: 52 tccaagttggatgaatttatgaacttcattgagaaaataaggaagtatggattaattcct 111
Query: 115 ccatcttattcagctgaatcaaaattgccaattatcctcttaatagatgatcttcccgtg 174
||| || | ||||||||||||| ||| | || ||| | || |||||||| || |||
Sbjct: 112 tcattttct---gctgaatcaaaatcaccagtcatgctcctgatcgatgatctccctgtg 168
Query: 175 acaaatggaagagttgcttttgaaagacttcaaaactgtttgctacttcttgtaagaaca 234
|||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||| ||
Sbjct: 169 gcaaatggaagagctgcttttgaaagacttcaaaactgcttgctccttcttgtgagatca 228
Query: 235 actcggataccaacagtgatactggtaactgactatgataaggcagatttggcagacaac 294
|||| | | ||||||| |||||| |||||||||||| ||| | ||||| |||||| ||
Sbjct: 229 actcaggtgccaacagctatactgttaactgactatggtaaagaagattcagcagactac 288
Query: 295 acttcacgatacatggaagaacttcagtcgtctcttgagagtgctggagcttgtaaggtt 354
|| | || |||||||||||||||| | ||||||||| || ||||||||||||||||||
Sbjct: 289 tctgcccgttacatggaagaacttctgcagtctcttgaaagggctggagcttgtaaggtt 348
Query: 355 gcttttaatccaattacaaataactccattaagaaggcacttacaaaaatatgcaaacac 414
||||||||||| ||||||| || ||||| ||||||| |||||| | ||||||||||||
Sbjct: 349 gcttttaatcctattacaagtagttccataaagaaggtacttaccagaatatgcaaacag 408
Query: 415 gaacagtttaatgtgactgctgaacagattgatctgatagccaaagccagtggaggtgat 474
| ||| |||||| ||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 409 aagcagcataatgtaactgctgaacagattgagctaatagcaaaagccagtggaggtgat 468
Query: 475 atcagaaatgcaattacatctttacaacttttctgtgtgaaaccaaacatggggctca-- 532
|||||| ||||||||||||||||||| ||||||| |||||||||| | || |||||
Sbjct: 469 atcagacatgcaattacatctttacagcttttctctgtgaaaccagatattatgctcagt 528
Query: 533 -actcatcattgtccaattctactccgagttactctgatggaaaaccagatgatattaat 591
||||||||||||| | ||||| |||||||| ||||||| | ||||||| ||||||
Sbjct: 529 ttatcatcattgtccacattgactccaagttactcagatggaagagcagatgagattaat 588
Query: 592 tctttgatctgtggtttttcattgctatttggcagagatgagactctttctctgtttcat 651
|||||| | ||||||| || |||||||||||||||||||| ||||||||| | ||||||
Sbjct: 589 gctttgaccagtggtttctccttgctatttggcagagatgaaactctttctttatttcat 648
Query: 652 gctctgggcaagtttctgcataataaaagagaaactgaag 691
|| || |||||||||||||| |||||||| ||||||||||
Sbjct: 649 gcacttggcaagtttctgcacaataaaagggaaactgaag 688