Jatropha Genome Database
- JcCB0454241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0454241.10 + phase: 0
(1227 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011226 UDP-n-acetylmuramoylalanyl-d-glutamate--2,6-diamin... 1273 0.0
>30190.m011226
UDP-n-acetylmuramoylalanyl-d-glutamate--2,
6-diaminopimelate ligase, putative
Length = 2343
Score = 1273 bits (642), Expect = 0.0
Identities = 1018/1145 (88%), Gaps = 3/1145 (0%)
Strand = Plus / Plus
Query: 1 atgagtttggctgagcttttagatgagagtaaagtggtgcctgtttcagttgctggggac 60
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 727 atgagtttggctgagcttttggatgagagtaaagtggtgccagtttcagttgctggagat 786
Query: 61 ttggaggtggagattactgggattcaacacgattccagaatggtaaatgctggtgatttg 120
||||||||||||||||||||||| || || ||||| |||||||| |||||||||||||||
Sbjct: 787 ttggaggtggagattactgggatacagcatgattcgagaatggtgaatgctggtgatttg 846
Query: 121 tttgtgtgttgtgtcgggaggaaaacagatggacatttgtatttgagtgaggcagacaag 180
||||| |||||||| ||||||| |||||||||||||||||||||||||||||| || |||
Sbjct: 847 tttgtctgttgtgttgggaggagaacagatggacatttgtatttgagtgaggctgataag 906
Query: 181 agaggagcggttgctgttgtggccagtaaagagattgatatagaggagactttggggtgt 240
|||||||| ||||| ||||| || ||||| |||||||||||||| ||||| ||||||||
Sbjct: 907 agaggagctgttgcagttgtagctagtaaggagattgatatagaagagacgttggggtgc 966
Query: 241 aaaggtttggtaattgtggaggatactaatgctgttttgcctgcgttggctgcagcgttt 300
|||| |||||| |||||||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 967 aaagctttggttattgtggaggatactaatgctgttttgcctgcattatctgcagctttt 1026
Query: 301 tataagtacccgtcaaaaaacatggctgtgattgggataactggaacagatggcaaaact 360
|||||||| || || |||||||||||||||||||| |||| ||| || ||||||||||
Sbjct: 1027 tataagtatccttcgaaaaacatggctgtgattggtataagtgggacgaatggcaaaacc 1086
Query: 361 actgcagcatatttgattaaagggatgtatgaggcaatggggttgaggactgggatgtta 420
|| |||||||||||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 1087 accacagcatatttgattaagggaatgtatgaggcaatgggattgaggactggtatgttc 1146
Query: 421 agtacagttgcgtattatatacatggcgataataagttggaatcacctaatactgcgccg 480
||||||||||| || ||| ||||||| ||||||||||||||||||||||| ||| | ||
Sbjct: 1147 agtacagttgcatactatgtacatggagataataagttggaatcacctaacactacacca 1206
Query: 481 gatgcggttttagttcagaatttgatggctaagatggtacataatgggactgaagctgtt 540
||||| || || |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1207 gatgctgtcttggttcagaatttgatggctaagatgctacataatgggactgaagctgtt 1266
Query: 541 gttatggaggtgtcttcccaaggaccagcttctgggagttgcaatgaggttgattttgat 600
|| ||||||| ||||| || ||| ||||| ||||| || |||||||||||||||||
Sbjct: 1267 gtgatggaggcatcttctcatggattggcttcagggaggtgtgatgaggttgattttgat 1326
Query: 601 atttcagtttttaccaatttaagagtggatcacctgga---ttttcaagggactgaggag 657
||| |||| ||||||||||||| || |||||| | || ||| || ||||||||||||
Sbjct: 1327 attgcagtatttaccaatttaacaggtgatcacttagattctttccatgggactgaggag 1386
Query: 658 gaatatagggatgccaaagctgagttgtttgctaggatggttgatccagaaaggcacagg 717
|| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct: 1387 gagtatagggatgcgaaagctaagttgtttgctaggatggtggatccagaaaggcatagg 1446
Query: 718 aaaattgttaacattgaggaccccaatgcttcnnnnnnnattgcacaggggaatccagat 777
|||||||| |||||||| || ||||||| || |||||||| || |||||||||
Sbjct: 1447 aaaattgtcaacattgatgattccaatgcatctttcttcattgcacaaggcaatccagat 1506
Query: 778 gtgcctgttgtgacctttgctatggacaataaaagtgcagatgttcatcccttgaagttt 837
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1507 gtgcctgttgtgacctttgctatagagaataaaagtgcagatgttcatcccttgaagttt 1566
Query: 838 gaactgtccctttttgagacacaggttttggttaatacaccccatggtatattagagatt 897
|| || || | ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 1567 gagctctcattgtttgagacacaggttttggttaatacaccacatggtatcttagagatt 1626
Query: 898 tcatctggattgcttgggaggcataatatctataatattctagctgctgttgctgttggg 957
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1627 tcatctggattgcttgggaggcataatatctataatattctagctgctgtagctgttgga 1686
Query: 958 attgcagttggggcaccattggaggacatagtcagagggattgaagagattgatgcagtt 1017
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct: 1687 attgcagttggggcaccattagaggacattgtcagagggattgaagaagttgatgcagta 1746
Query: 1018 cctggtaggtgtgagttaatagatgaggagcaggcatttggtgtgatagtggactctgct 1077
|||||||||||||| |||||||||||||||||||||||||| ||||||||||| | ||||
Sbjct: 1747 cctggtaggtgtgaattaatagatgaggagcaggcatttggggtgatagtggattatgct 1806
Query: 1078 catactcctgaagccctatctaggctgcttgattctgtaagagagctcaggcctaggagg 1137
||||||||||| | |||||||| || |||||||| ||||||||||||| ||||| ||||
Sbjct: 1807 catactcctgatggcctatctatactacttgattcagtaagagagctcaagcctaagagg 1866
Query: 1138 attat 1142
|||||
Sbjct: 1867 attat 1871