Jatropha Genome Database
- JcCB0453831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0453831.10 - phase: 2 /partial
(637 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007080 ubiquitin-protein ligase, putative 525 e-148
30170.m014089 ubiquitin-protein ligase, putative 52 4e-06
>30131.m007080 ubiquitin-protein ligase, putative
Length = 1302
Score = 525 bits (265), Expect = e-148
Identities = 533/621 (85%), Gaps = 6/621 (0%)
Strand = Plus / Plus
Query: 1 gcatgctttttctgagctcatggcaacttcacatagagaaaggtggtcttttgacactga 60
|||||| ||||| ||||||||||| | ||| |||| ||||| ||||||||| || |||
Sbjct: 669 gcatgcattttcggagctcatggccaattctcataaagaaaagtggtctttgga---tga 725
Query: 61 gtcctggggcttgaatcatgagaaaaccaggtccagtggtcgaatatcttcttctccctc 120
|||| ||||| ||||||||||| ||||| |||||||||||| | || ||||||||||
Sbjct: 726 ctccttgggctataatcatgagaacaccagatccagtggtcgactgtcagcttctccctc 785
Query: 121 tgttgattttcaaacatgtgggatttgttcaaagctgttgactgagaaatctttgtggag 180
||||||| |||||||||||||||| || ||||||| |||||||||||||| ||||||||
Sbjct: 786 tgttgatcttcaaacatgtgggatatgcacaaagctattgactgagaaatccttgtggag 845
Query: 181 cagccagaagcttgttttgagtaacgagctctctgttgttgctgttctaacttgtgggca 240
|||||||||||||||||||| || ||||| ||||||||||||||||||| ||| |||||
Sbjct: 846 cagccagaagcttgttttgaacaatgagctttctgttgttgctgttctaatttgcgggca 905
Query: 241 tgtttatcacgccgagtgtttggagactttgacacctgacattaacaagtatgatccatc 300
||||||||| || || |||||||||||| |||||||||| ||| ||||||| ||||| ||
Sbjct: 906 tgtttatcatgctgaatgtttggagactatgacacctgaaattcacaagtacgatccttc 965
Query: 301 ttgtcctgtttgtacgctaggggaaaaacaaacccataagctgtctcaaaaagcttttaa 360
||| ||| ||||||| | ||||| || || ||||||||||| |||||||| ||||||||
Sbjct: 966 ttgccctatttgtaccttgggggagaagcagacccataagctttctcaaaaggcttttaa 1025
Query: 361 agcagaattggatttgaaggcaaaaaacaaaagatcgagaaaccgggttgtggacagtga 420
||||||| |||||||||||||||||||||| ||||| || || ||| |||| || |||||
Sbjct: 1026 agcagaaatggatttgaaggcaaaaaacaagagatcaaggaatcggattgtcgatagtga 1085
Query: 421 tctcgatggtgattctgtcatgtttaatcgcctaaaaggtagtggacatgaaggaaaggg 480
|||| ||||||||||| |||||||| ||||| |||||||| | |||||||||||||||||
Sbjct: 1086 tctcaatggtgattctatcatgtttgatcgcataaaaggtggcggacatgaaggaaaggg 1145
Query: 481 tcccaagatggcttcaagctccagcatgaagagctccttggcaaagcctttcttgaagcg 540
|||||||||| | || || ||||| |||||||| |||| ||||||||||| ||||| |
Sbjct: 1146 tcccaagatgacctccagttccagtttgaagagcaccttagcaaagccttttctgaagag 1205
Query: 541 gcatttttcatttggatcatcaaaggctagtaaatccttaacagagaaccatgcaaccaa 600
|||||||||||||| ||||||| |||||| |||||||||||||||| | |||||
Sbjct: 1206 acatttttcatttgg---ttcaaagggaagtaaagccttaacagagaaccactcgaccaa 1262
Query: 601 aaagaagggattcttctggac 621
|||||||| ||||||||||||
Sbjct: 1263 aaagaaggaattcttctggac 1283
>30170.m014089 ubiquitin-protein ligase, putative
Length = 1320
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 8 ttttctgagctcatggcaacttcacatagagaaaggtggtcttttgacactgag 61
||||||||||| |||| ||||||| ||||| |||||||||||||||| ||||
Sbjct: 697 ttttctgagcttgtggcttcttcacaaagagagaggtggtcttttgacagtgag 750