Jatropha Genome Database
- JcCB0451681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0451681.10 - phase: 0
(693 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011119 Dehydration-responsive element-binding protein 1A,... 174 5e-43
60638.m00016 CBF-like transcription factor, putative 174 5e-43
30190.m011120 Dehydration-responsive element-binding protein 1F,... 153 2e-36
30174.m008790 Transcriptional factor TINY, putative 90 2e-17
29794.m003381 Transcriptional factor TINY, putative 80 2e-14
28353.m000054 DNA binding protein, putative 56 3e-07
>30190.m011119 Dehydration-responsive element-binding protein 1A,
putative
Length = 705
Score = 174 bits (88), Expect = 5e-43
Identities = 190/224 (84%)
Strand = Plus / Plus
Query: 142 gctggaagaagagtattcaaagagactcgccatccagtttacagaggtgtaaggaagaga 201
||||| || ||||| || |||||||| || ||||| |||| ||||||||||||| ||||
Sbjct: 163 gctgggaggagagtgtttaaagagacccgacatccggtttttagaggtgtaaggaggaga 222
Query: 202 aatgggaataaatgggtttgtgagttaagagaaccgaacaagaaaacaagaatatggctt 261
||||| ||||||||||| |||||| | | | || || || ||| ||||||||||||||
Sbjct: 223 aatggcaataaatgggtatgtgaggttcgtgtgccaaataaaaaatcaagaatatggctt 282
Query: 262 gggacttaccctacaccagaaatggcagctagggcacatgatgttgctgcattggctttt 321
|| ||||| |||||||||||||||||||| || ||||||||||| ||||||||||| |
Sbjct: 283 ggaacttatcctacaccagaaatggcagccagagcacatgatgtagctgcattggcccta 342
Query: 322 agaggcaagtctgcttgtcttaactttgctgattcagcttggag 365
|||||||| ||||||||||| |||||| ||||||| ||||||||
Sbjct: 343 agaggcaaatctgcttgtctcaacttttctgattccgcttggag 386
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 556 tttgatatgccaagattacttgtggacatggctcaaggtcttttactctctcctccccgt 615
||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||||| ||||
Sbjct: 574 tttgacatgccaagcttacttgtggaaatggcacaaggtcttttactatctcctctccgt 633
Query: 616 tttgaag 622
|||||||
Sbjct: 634 tttgaag 640
>60638.m00016 CBF-like transcription factor, putative
Length = 768
Score = 174 bits (88), Expect = 5e-43
Identities = 178/208 (85%)
Strand = Plus / Plus
Query: 157 ttcaaagagactcgccatccagtttacagaggtgtaaggaagagaaatgggaataaatgg 216
||||| |||||| | ||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 118 ttcaaggagactaggcatccgatttatagaggtgtaaggcgaagaaatgggaataaatgg 177
Query: 217 gtttgtgagttaagagaaccgaacaagaaaacaagaatatggcttgggacttaccctaca 276
|| ||||| | |||||||||||| |||| ||||||||||||| ||||| ||||||||
Sbjct: 178 gtatgtgaagttagagaaccgaacctgaaatcaagaatatggctagggacataccctacc 237
Query: 277 ccagaaatggcagctagggcacatgatgttgctgcattggcttttagaggcaagtctgct 336
||||||||||||||||||||||||||||||||||| ||||| || ||||| ||| ||||
Sbjct: 238 ccagaaatggcagctagggcacatgatgttgctgctttggcattcagaggagagtttgct 297
Query: 337 tgtcttaactttgctgattcagcttgga 364
| ||| |||| | ||||||||||||||
Sbjct: 298 tctctcaactatcttgattcagcttgga 325
>30190.m011120 Dehydration-responsive element-binding protein 1F,
putative
Length = 693
Score = 153 bits (77), Expect = 2e-36
Identities = 122/137 (89%)
Strand = Plus / Plus
Query: 241 aagaaaacaagaatatggcttgggacttaccctacaccagaaatggcagctagggcacat 300
|||||| |||||||||||||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 235 aagaaatcaagaatatggcttggtacttatcctactcctgaaatggcagctagagcacac 294
Query: 301 gatgttgctgcattggcttttagaggcaagtctgcttgtcttaactttgctgattcagct 360
|| ||||||||||||||| ||||||| || |||||||| |||||||||||||| || |||
Sbjct: 295 gacgttgctgcattggctcttagaggaaaatctgcttgccttaactttgctgactctgct 354
Query: 361 tggagattgcctgtgcc 377
||||| |||||||||||
Sbjct: 355 tggaggttgcctgtgcc 371
>30174.m008790 Transcriptional factor TINY, putative
Length = 831
Score = 89.7 bits (45), Expect = 2e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 241 aagaaaacaagaatatggcttgggacttaccctacaccagaaatggcagctagggcacat 300
|||||| |||||||||||||||| ||||| |||||| |||||||||||||||| || |||
Sbjct: 337 aagaaatcaagaatatggcttggtacttatcctacagcagaaatggcagctagagctcat 396
Query: 301 gatgttgctgcattggc 317
||||| ||||| |||||
Sbjct: 397 gatgtagctgctttggc 413
>29794.m003381 Transcriptional factor TINY, putative
Length = 813
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 256 tggcttgggacttaccctacaccagaaatggcagctagggcacatgatgttgctgc 311
|||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 232 tggcttggtactttccctacacctgaaatggcagcaagggcacatgatgttgctgc 287
>28353.m000054 DNA binding protein, putative
Length = 663
Score = 56.0 bits (28), Expect = 3e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 241 aagaaaacaagaatatggcttgggacttaccctacaccagaaatggcagctagggcacat 300
|||||| ||||||| |||||||| ||||| || ||| |||||||||||||| | || |||
Sbjct: 283 aagaaatcaagaatttggcttggtacttatccaacagcagaaatggcagctcgagcccat 342
Query: 301 gatg 304
||||
Sbjct: 343 gatg 346