Jatropha Genome Database

JcCB0450851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0450851.10 + phase: 1 /pseudo/partial
         (467 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000793 ATP binding protein, putative                           341   2e-93

>30008.m000793 ATP binding protein, putative
          Length = 2814

 Score =  341 bits (172), Expect = 2e-93
 Identities = 328/380 (86%)
 Strand = Plus / Plus

                                                                        
Query: 45   gtgaagctacttgaactgagggaggccaatcatattgagttttgcagaataaaaaatgtg 104
            |||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||| 
Sbjct: 1345 gtgaagcttcttgaactgagggaggctaatcatttagagttttgcagaataaaaaatgtt 1404

                                                                        
Query: 105  cttgatgagatattgcacatgcataggaacttggagctcactgaaatcctaaaatcatta 164
            |||||||| || |||||||||||||| ||||  ||||| | |||||| ||||| ||||||
Sbjct: 1405 cttgatgaaatcttgcacatgcatagaaactctgagctgaatgaaattctaaagtcatta 1464

                                                                        
Query: 165  atggatcctacatgggtggcaactggattgaaaattgacttcgagacattagtcaatgaa 224
            ||||||||||| |||||||||||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 1465 atggatcctacttgggtggcaactggtttgaaaattgattttgagaccttagttaatgaa 1524

                                                                        
Query: 225  tgtgaatgggcttcagatagaatttgtgaaatgatctatctagaagataaaattgaccga 284
            |||||||||||||||| |||||| ||||||||||||| |||||| | | ||  ||||| |
Sbjct: 1525 tgtgaatgggcttcaggtagaatctgtgaaatgatctctctagatggtgaacatgaccaa 1584

                                                                        
Query: 285  aagtcagattcccattctgtcgttcctagtgaattttttgaggatatggagttgtcttgg 344
            |||| |   ||| |||||||  |||||||||| |||||||||||||||||||  |  |||
Sbjct: 1585 aagttaagctcctattctgttattcctagtgatttttttgaggatatggagtctttgtgg 1644

                                                                        
Query: 345  agaggtcgtgtaaagaggatccatatagaggaagaatttgcagaagtggaaagtgcagca 404
            | ||||||||| |||||| |||||||||| | ||||| ||||||||| || || ||||||
Sbjct: 1645 aaaggtcgtgtgaagagggtccatatagaaggagaatgtgcagaagtagatagggcagca 1704

                                
Query: 405  caggccttgtcatcagcagt 424
            || ||| |||||||||||||
Sbjct: 1705 catgccctgtcatcagcagt 1724