Jatropha Genome Database
- JcCB0450571.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0450571.10 - phase: 2 /partial
(1144 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006420 transcription factor, putative 672 0.0
>30169.m006420 transcription factor, putative
Length = 1365
Score = 672 bits (339), Expect = 0.0
Identities = 540/607 (88%)
Strand = Plus / Plus
Query: 26 tttagtgccacaaataatgggaatgggagtgaagatgatgaaccgagttttatggaagat 85
|||||| |||||||| |||| |||| ||||||||||||||| |||||||||| |||||||
Sbjct: 247 tttagtcccacaaatgatggcaatgtgagtgaagatgatgagccgagttttacggaagat 306
Query: 86 gggaacggggagagttcaagtgcagctaagggtaagaacggatcaacatggcaacgaatg 145
||||| || || | ||| |||| |||||| |||| || ||||| ||||||| || |||
Sbjct: 307 gggaatggtgataattccagtggggctaagagtaaaaagggatctccatggcagcggatg 366
Query: 146 aaatggacagataatatagttaggcttcttatagcaatagttgcttgtgtgggtgatgat 205
||||||||||||||| | |||||||||||||||||| | |||||||||||||||||||||
Sbjct: 367 aaatggacagataatgtggttaggcttcttatagcagtggttgcttgtgtgggtgatgat 426
Query: 206 ggtccatttgagggcgttgaggggcttaagaggaaatccgggattttgcaaaagaaaggc 265
||| ||||||| || ||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 427 ggtgcatttgatggtgttgaggggcttaagagaaaatctgggattttgcagaagaagggc 486
Query: 266 aagtggaaaacagtttcaaagatgatgatcagtaagggctgtcacgtttcgccacaacag 325
|||||||||||||| |||||||| ||||||||||||| ||||| ||||| |||||||||
Sbjct: 487 aagtggaaaacagtatcaaagatcctgatcagtaagggttgtcatgtttctccacaacag 546
Query: 326 tgtgaggataaatttaatgatttgaataaaaggtacaagagattgaatgagattcttgga 385
|||||||||| ||||||||| | ||||| |||||||||||||| ||||| |||||||||
Sbjct: 547 agtgaggataagtttaatgatctcaataagaggtacaagagattaaatgacattcttgga 606
Query: 386 aggggaactagttgtagagtggtggagaaccctgcacttatggactcaatgcctctttca 445
|| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 607 agaggtactagttgtagagtggtggagaaccctgctcttatggactcaatgccgctttca 666
Query: 446 gataaggcaaaggatgatgttagaaagatattgagttcaaaacatttattttacaaggaa 505
| |||||||| || |||||||| ||||||||||| ||||||||| | ||||| ||||||
Sbjct: 667 gccaaggcaaaagaagatgttaggaagatattgagctcaaaacatctgttttataaggaa 726
Query: 506 atgtgtgcatatcataatgggcaaaggatacccaattgccaagatcttgatctacaaggt 565
||||| || || ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 727 atgtgcgcttaccataatgggcaaatgatacccaattgccaagatcttgatctacaaggc 786
Query: 566 tgtttgtcacctcttgaaaggtgctcaaaagacaataatggctcagaggaggaggaagct 625
| || | |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 787 ttttcattacctcttgaaaggtgctcaagagacaataatggctcagaggaggaggaagct 846
Query: 626 gagggac 632
|||||||
Sbjct: 847 gagggac 853
Score = 426 bits (215), Expect = e-118
Identities = 371/423 (87%)
Strand = Plus / Plus
Query: 722 gagaggaataaagtaaatgaagaggatgcccgtctttggtctcaatcaggtgggttgatt 781
||||||||||||||||||||||||||||||| ||||||| |||| |||||||||| |
Sbjct: 937 gagaggaataaagtaaatgaagaggatgcccatctttggcctcagtcaggtgggtgcaac 996
Query: 782 ggctttgaggttgaaatggctgcgatttttcaagatcctgcagtgtcattgtgggagaaa 841
||||||||||||||||||||| |||||||||||| || | |||||||| |||||||||
Sbjct: 997 agctttgaggttgaaatggctgggatttttcaagacccgtcggtgtcattatgggagaaa 1056
Query: 842 aaggagtggattaaaaagcagaagttgcagctactagagcaaagagtcagcatccaatct 901
|| || ||||| || || |||||||||||||| || ||||||||||| |||||||| ||
Sbjct: 1057 aaagaatggataaataaacagaagttgcagctgctggagcaaagagttagcatccaggct 1116
Query: 902 caagcttttgagcttgagaagcaacggttcaaatggttgagatactgcagcaagaaagat 961
||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1117 caagcatttgagcttgagaagcaacgcttcaagtggttgagatactgcagcaagaaagat 1176
Query: 962 agagagtttgagacgtcaaggctggaaaatgagaggttgagactagaaaatgagcaaagt 1021
| || ||||||| || |||||||||||||||||| |||||||||| || |||||||||
Sbjct: 1177 aaggaatttgagaagttgaggctggaaaatgagaggatgagactagagaacgagcaaagt 1236
Query: 1022 atattacaactgaggcagaagcaactaggcatggactttaggagctcagaaacatctcga 1081
|||| ||||| || ||||||||||| | ||||| || |||||||||||| |||| |
Sbjct: 1237 gtattgcaactaagacagaagcaactggaaatggatttgaggagctcagaatcatccagg 1296
Query: 1082 gaacccacttcccttggtattgacagactgcaaggaagagatcaaattgatttgggcagg 1141
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1297 gaccccacttcgcttggtattgacagactgcaaggaagagatcaaattgatttgggaagg 1356
Query: 1142 cat 1144
|||
Sbjct: 1357 cat 1359