Jatropha Genome Database

JcCB0449231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0449231.10 + phase: 1 /partial
         (470 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29657.m000468 biotin synthase, putative                               347   4e-95

>29657.m000468 biotin synthase, putative
          Length = 1128

 Score =  347 bits (175), Expect = 4e-95
 Identities = 321/369 (86%), Gaps = 3/369 (0%)
 Strand = Plus / Plus

                                                                        
Query: 105  ccagagagtgttccaatcaatgcactagtttcagtgaaaggtacacctctacaagatcaa 164
            |||||||||||||| || ||||||||| || |||| ||||| ||||||||  ||||||| 
Sbjct: 757  ccagagagtgttccgattaatgcactaattgcagttaaaggcacacctctggaagatcag 816

                                                                        
Query: 165  aagccagttgaaatatgggagatgattcgaatgattgctactgcacgaatagtcatgcca 224
            |||||||| || ||||||||||||||||||||||| |||||||| || ||| ||||||||
Sbjct: 817  aagccagtggagatatgggagatgattcgaatgatagctactgctcggataatcatgcca 876

                                                                        
Query: 225  aaagcaatggtcagattgtcagctggcagagtccgtttctcaatgcctgaacaagctctc 284
            |||||||||||  |  ||||||||||  |||| |||||||||||  |||| || ||||||
Sbjct: 877  aaagcaatggtgcggctgtcagctggtcgagttcgtttctcaattgctgagcaggctctc 936

                                                                        
Query: 285  tgctttcttgctggtgcaaattctatctttactggtgagaagctgttgacaactcctaac 344
            ||||||||| |||| ||||||||||| ||||| || ||||||||||||||||||||||| 
Sbjct: 937  tgctttctttctggagcaaattctatatttacaggcgagaagctgttgacaactcctaat 996

                                                                        
Query: 345  aatgacttcgatgttgatcaacagatgttcaaggtgcttggtttgataccaaaagctcct 404
            ||||| || |||| ||| ||||  ||||||||| ||||||||||||| ||||||||||||
Sbjct: 997  aatgattttgatgctgaccaactcatgttcaagttgcttggtttgatcccaaaagctcct 1056

                                                                        
Query: 405  agtttttccgaagacgaagagatagcttttgaatcagaaaattgtc---aagctgtttct 461
            |||||| | ||||| ||||||| |||||| ||||||||||||||||   |||||||||||
Sbjct: 1057 agttttcctgaagatgaagagagagctttggaatcagaaaattgtcaggaagctgtttct 1116

                     
Query: 462  agctcaggt 470
            |||||||||
Sbjct: 1117 agctcaggt 1125



 Score =  101 bits (51), Expect = 4e-21
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaatattacccaaatattatcaccacaagaacttacgatgaacgcttgcaaacccttga 60
           ||||||||||||||| |||||| | ||||||| ||| ||||||||| || ||||||| ||
Sbjct: 585 agaatattacccaaacattatctctacaagaagttatgatgaacgcctgaaaaccctgga 644

                                              
Query: 61  atatgtccgagaagcaggaattaatgtctgttcag 95
           | |||||||||||| ||||||||||||||| ||||
Sbjct: 645 acatgtccgagaagtaggaattaatgtctgctcag 679