Jatropha Genome Database
- JcCB0448381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0448381.10 - phase: 0 /pseudo/partial
(774 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29681.m001339 ATP-binding cassette transporter, putative 630 e-180
30146.m003512 ATP-binding cassette transporter, putative 78 9e-14
30146.m003513 ATP-binding cassette transporter, putative 70 2e-11
30146.m003511 ATP-binding cassette transporter, putative 68 9e-11
>29681.m001339 ATP-binding cassette transporter, putative
Length = 4302
Score = 630 bits (318), Expect = e-180
Identities = 646/754 (85%), Gaps = 1/754 (0%)
Strand = Plus / Plus
Query: 22 ggagaaatgattgttggtccaagaaaaaccttatttatggatgaaatatctactggactt 81
||||||||||||||||| ||||||||||||||| | ||||| |||||||| ||||| |||
Sbjct: 1021 ggagaaatgattgttgggccaagaaaaaccttactaatggacgaaatatccactggcctt 1080
Query: 82 gatagttccacaacataccaaatagtgaaatgtatagggaactttgttcatcaaatggat 141
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1081 gatagttccacaacatatcaaatagtgaaatgtataggaaactttgttcatcaaatggac 1140
Query: 142 ggaactgtactgatggctcttctgcagcctccacctgagacatttgatatgtttgatgat 201
||||| ||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||
Sbjct: 1141 ggaaccgtactaatggctcttcttcagcctcctcctgagacatttgatctgtttgatgat 1200
Query: 202 ttaatactattatcagaaggctacatggtgtatcaaggcccaagagcagaagttttagag 261
|| | |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 1201 ttggtgctattatcagaaggctacatggtgtaccaaggcccacgagcagaagttctagag 1260
Query: 262 ttctttgagtcacttggatttcagttaccaccacgcaagggcattgcagattttcttcaa 321
|||||||||||||| ||||||| |||||||| || ||||| | ||||||||||||||
Sbjct: 1261 ttctttgagtcactaggatttcgattaccacctcgaaagggggtagcagattttcttcag 1320
Query: 322 gaggtcacttcaaaaaaggatcaagcacaatactgggctgatccttcaaaaccatatgta 381
|||||||| || ||||||||||||||||| || |||| ||||| || ||||||||||| |
Sbjct: 1321 gaggtcacctctaaaaaggatcaagcacagtattgggatgatcatttaaaaccatatgca 1380
Query: 382 tacatgcctgttccagaaattgcaagagcattcgaaaattctagatttggaaagtctgtg 441
||||| || |||||||||||||||| |||||| ||| |||||| | |||| |||||||
Sbjct: 1381 tacattccagttccagaaattgcaaaagcatttaaaagttctaggtggggaaggtctgtg 1440
Query: 442 gaatcctcactatccattccattcgacaaatcaaaaagtcatccttcagctttgtctaaa 501
|||||| | || | ||||| |||||| |||| | ||||||||||||| | |||
Sbjct: 1441 gaatccatggtttctgtcccatttgacaaaacaaaggattctccttcagctttggcgaaa 1500
Query: 502 acgagatatgctgtgtcaatatgggaactgtttaaagcatgctttgcgcgagaaattcta 561
||| || |||||| ||| |||||| || || |||||||| ||||| ||||| | |
Sbjct: 1501 acggaatttgctgtaccaagatgggagctcttaaaagcatgttttgcacgagaggtcttg 1560
Query: 562 cttatcaatcggcatcgttttctttattgttttaggacattccaggtcttttttattggg 621
|| ||| ||||||| | ||||||||| ||| |||||||| |||||||||||| ||||
Sbjct: 1561 ctcatccgtcggcattggtttctttatattttcaggacattgcaggtcttttttgttgga 1620
Query: 622 tgcatcacttgcacagttttcttacggacaagattgcatcccacagatgagttaaatggg 681
||||| ||| ||||| |||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 1621 tgcataactagcacaattttcttacgaacaaggttgcatcccacagatgagataaatggg 1680
Query: 682 aatctctatctctcttgcctcttttttgggctggtgcacatgatgtttaatgg-ctttct 740
||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 1681 aatctctatctctcttgtctattttttgggctggtgcacatgatgtttaatggattttct 1740
Query: 741 gaactatccttactgatatttcgattaccagttt 774
|| ||||| | ||||||||| || | |||||||
Sbjct: 1741 gagttatcccttctgatatttagactcccagttt 1774
>30146.m003512 ATP-binding cassette transporter, putative
Length = 4419
Score = 77.8 bits (39), Expect = 9e-14
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 20 caggagaaatgattgttggtccaagaaaaaccttatttatggatgaaatatctactggac 79
||||||| ||||||||||| || | |||||| |||| |||||||| ||||| ||||| |
Sbjct: 1001 caggagagatgattgttgggcccacaaaaacactattcatggatgagatatcaactggcc 1060
Query: 80 ttgatagttccacaacataccaaatagtgaa 110
| ||||| ||||||||||| |||||||||||
Sbjct: 1061 tagatagctccacaacatatcaaatagtgaa 1091
>30146.m003513 ATP-binding cassette transporter, putative
Length = 4494
Score = 69.9 bits (35), Expect = 2e-11
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 20 caggagaaatgattgttggtccaagaaaaaccttatttatggatgaaatatctactggac 79
||||||||||||||||||| || | |||||| ||||||||||||| ||||| || ||
Sbjct: 1067 caggagaaatgattgttgggcctacaaaaacactatttatggatgagatatcaacgggtt 1126
Query: 80 ttgatagttccacaacataccaaatagtgaa 110
| ||||| || |||||||| |||||||||||
Sbjct: 1127 tagatagctctacaacatatcaaatagtgaa 1157
>30146.m003511 ATP-binding cassette transporter, putative
Length = 4308
Score = 67.9 bits (34), Expect = 9e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 298 aagggcattgcagattttcttcaagaggtcacttcaaaaaaggatcaagcacaatactgg 357
||||||||||| |||||||| |||||||| || ||||| || ||||||| ||||||||||
Sbjct: 1222 aagggcattgctgattttctgcaagaggttacatcaaagaaagatcaagaacaatactgg 1281
Query: 358 gc 359
||
Sbjct: 1282 gc 1283
Score = 58.0 bits (29), Expect = 8e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 20 caggagaaatgattgttggtccaagaaaaaccttatttatggatgaaatatctactggac 79
|||| |||||||||||||| || | |||||| | ||||||||||| ||||| ||||| |
Sbjct: 944 caggggaaatgattgttggacctacaaaaactctgtttatggatgagatatcaactggtc 1003
Query: 80 ttgatagttccacaacataccaaat 104
| || || ||||||||||| |||||
Sbjct: 1004 tggacagctccacaacatatcaaat 1028