Jatropha Genome Database

JcCB0447941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0447941.10 - phase: 0 /partial
         (282 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27942.m000154 conserved hypothetical protein                          250   4e-66

>27942.m000154 conserved hypothetical protein
          Length = 1311

 Score =  250 bits (126), Expect = 4e-66
 Identities = 177/194 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtgtaacagtgcaagaaagtcttaaggagaaatccataggaattactgaagaaagtcta 60
           ||||||||||||||||| |||||||||||||| |||||||| || |||||||||||| | 
Sbjct: 466 ggtgtaacagtgcaagacagtcttaaggagaactccatagggatcactgaagaaagtatg 525

                                                                       
Query: 61  ttacaactaaagtatgatccacggtctgtttggggttatattgaggttcatatagaacaa 120
           |||||| | |||||||||||||||||||||||||||||| ||||||||||||| || |||
Sbjct: 526 ttacaaatgaagtatgatccacggtctgtttggggttatgttgaggttcatattgagcaa 585

                                                                       
Query: 121 ggacctgtgctagaatgggctggttttccccttggtgtggttaaaggcatagctggacag 180
           ||||||||||||||||||  ||||||||| ||||| || |||||||||||||||||||||
Sbjct: 586 ggacctgtgctagaatggattggttttcctcttggcgtagttaaaggcatagctggacag 645

                         
Query: 181 actcggctaaaggt 194
           || |||||||||||
Sbjct: 646 acacggctaaaggt 659