Jatropha Genome Database

JcCB0444751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0444751.10 + phase: 0 /pseudo/partial
         (291 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29703.m001477 acetyl-CoA carboxylase, putative                        127   4e-29

>29703.m001477 acetyl-CoA carboxylase, putative
          Length = 2229

 Score =  127 bits (64), Expect = 4e-29
 Identities = 88/96 (91%)
 Strand = Plus / Plus

                                                                        
Query: 59   cagcttacactccatatggtattctcatcccccattcagagtccatcacctagctaggcg 118
            |||||||||| ||||||||||||| |||||||| |||||||||||||| || ||||||| 
Sbjct: 1599 cagcttacaccccatatggtattcgcatccccctttcagagtccatcatcttgctaggca 1658

                                                
Query: 119  tactatggtattcgagtgggacaatgaatatgatag 154
            |||||||| ||| |||||||||||||||||||||||
Sbjct: 1659 tactatggaatttgagtgggacaatgaatatgatag 1694



 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                     
Query: 231  caattttcgagttgaggctgatggtataagcatgaatgttaatttggctgcgtattc 287
            ||||||| | ||||||||||||||| ||||||||||||||| ||||||||| |||||
Sbjct: 1821 caattttagggttgaggctgatggtgtaagcatgaatgttagtttggctgcttattc 1877