Jatropha Genome Database

JcCB0432331.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0432331.10 + phase: 0 /partial
         (330 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29883.m001987 trytophan synthase alpha subunit, putative              228   2e-59

>29883.m001987 trytophan synthase alpha subunit, putative
          Length = 942

 Score =  228 bits (115), Expect = 2e-59
 Identities = 160/175 (91%)
 Strand = Plus / Plus

                                                                       
Query: 146 ctaagcctgtagcagttggctttggcatatcaaaacctgagcatgtgaaacaggtggcgg 205
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 755 ctaagcctgtagcagttggctttgggatatcaaaacctgagcatgtgaaacaggtggcgg 814

                                                                       
Query: 206 ggtggggtgctgatggtgtcattgtaggtagtgcaattgtgaaggtgttgggtgatgcaa 265
           | ||||| || ||||||||||||||||||||||| || ||||| ||||||||||| ||||
Sbjct: 815 gatggggcgccgatggtgtcattgtaggtagtgctatggtgaaagtgttgggtgaagcaa 874

                                                                  
Query: 266 aatctccagaggaagggttgaaggaactagaaaatttaaccaaatctttgaagtc 320
           ||||||| |||||||||||  ||||| ||| || | |||||||||||||||||||
Sbjct: 875 aatctcccgaggaagggttagaggaattagcaactctaaccaaatctttgaagtc 929



 Score =  151 bits (76), Expect = 3e-36
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                       
Query: 24  ggtacttctcaccacaccaactactccaaaaggaagaatgaaagccattgtgaaagcatc 83
           ||||||||| || |||||||||||||||| || ||||||||||||||||||  ||||| |
Sbjct: 591 ggtacttctgacgacaccaactactccaacagaaagaatgaaagccattgttgaagcagc 650

                                                                   
Query: 84  agagggatttgtgtatcttgtaagctcagttggtgttactggtgcccgtgcatctg 139
           ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 651 agagggatttgtgtatcttgttagctcagttggagttacaggtgcccgtgcatctg 706