Jatropha Genome Database

JcCB0432281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0432281.10 - phase: 0 /pseudo
         (448 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008622 fkbp-type peptidyl-prolyl cis-trans isomerase 2, c...   254   4e-67

>30128.m008622 fkbp-type peptidyl-prolyl cis-trans isomerase 2,
           chloroplast, putative
          Length = 501

 Score =  254 bits (128), Expect = 4e-67
 Identities = 248/288 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 tcctgtttttgctgcaccagtgccagatatgaaagaacctcaagttgttaggacattaaa 161
           ||||||| ||||||| ||| ||||||  ||| |||||||| || || || ||||||| ||
Sbjct: 66  tcctgttcttgctgccccaatgccagggatggaagaacctgaaattattcggacattgaa 125

                                                                       
Query: 162 gcttgacagtggagtgaggattcaagagattatagaaggagaaggttcagaagctcatga 221
           | |||| | ||| ||||| |||| ||| ||| | || ||| |||||  ||||||||||||
Sbjct: 126 gtttgataatggggtgagaattcgagaaattgttgatggaaaaggtcaagaagctcatga 185

                                                                       
Query: 222 aggagatgtagttgaaataaattatgtatgtcgtcgatcaaatggatattttgtccacag 281
           |||||||||||||||| ||||||||||||| || || |||||||| |||||||| |||||
Sbjct: 186 aggagatgtagttgaagtaaattatgtatgccgccgctcaaatggctattttgttcacag 245

                                                                       
Query: 282 cacagtggatcaattcagtggggaaagttcacctgtcatacttcctttggatgagaacag 341
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 246 cacagtggatcaattcagtggggaaagctcacctgtcatacttcctttggatgagaatag 305

                                                           
Query: 342 gattattaagggcttgaaggatgtcttaattggcatgaaaattggagg 389
           ||| ||||| ||| |||| || ||| |||||||||||||  |||||||
Sbjct: 306 gatcattaaaggcctgaaagaagtcataattggcatgaaggttggagg 353