Jatropha Genome Database

JcCB0432121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0432121.10 - phase: 2 /partial
         (556 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30101.m000378 phosphatidylserine decarboxylase, putative              238   3e-62

>30101.m000378 phosphatidylserine decarboxylase, putative
          Length = 1263

 Score =  238 bits (120), Expect = 3e-62
 Identities = 237/276 (85%)
 Strand = Plus / Plus

                                                                        
Query: 278  ttcattgaaccagaactgtgtaccaacctgccaaggaaaaagctactgaattctcagcct 337
            ||||| |||||||||||  | || || |||||||| |||||| || ||||| || |||| 
Sbjct: 982  ttcatcgaaccagaacttcggacaaatctgccaagaaaaaagttattgaatactgagccc 1041

                                                                        
Query: 338  ccagaagaacgtgtatatgaacctgaaggcattggcaaaatgttgaagaaaggggaggag 397
            ||||||||||| || || || |||||||||||||| ||| |  ||||||||||||| |||
Sbjct: 1042 ccagaagaacgggtgtacgaccctgaaggcattggtaaagtactgaagaaaggggatgag 1101

                                                                        
Query: 398  gtggctgcattcaatatgggatcaacagtggtgcttgtcttccaggctcccacattaaag 457
            |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1102 gtggctgctttcaatatgggatcaacagtagtgctcgtcttccaggctcccacattaaag 1161

                                                                        
Query: 458  ctgttgaaaaacagggactcatcctcagagttcaggttcaatatcaaacgtggagacaga 517
            |   ||||  || ||| | |||||||||| |||||||||||||||| |||||| || |||
Sbjct: 1162 ccagtgaaggacggggtcccatcctcagacttcaggttcaatatcagacgtggggataga 1221

                                                
Query: 518  gtccgtgttggagaagcactgggaaggtggcatgat 553
            || ||||||||||||||| |||| ||||||||||||
Sbjct: 1222 gttcgtgttggagaagcattggggaggtggcatgat 1257



 Score =  147 bits (74), Expect = 8e-35
 Identities = 151/178 (84%), Gaps = 9/178 (5%)
 Strand = Plus / Plus

                                                                       
Query: 19  aaagggcctttattactgtgtaatatacttgaggcctggagattatcatcgaatacactc 78
           |||||| ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 810 aaagggtctttactactgcgtaatatacttgaggcctggagactatcatcgcatacactc 869

                                                                       
Query: 79  accggttgaatggaatgtgcttgtacgccggcattttacaggttgggttgggaatctatt 138
           ||| ||| |||||||||| ||||| |||||||||||| ||         ||| |||| ||
Sbjct: 870 accagttcaatggaatgttcttgtccgccggcattttgca---------gggcatctgtt 920

                                                                     
Query: 139 tccaatgaatgaacgtgctacaagaacaatcaggaatctttatgttgaaaatgaaagg 196
           ||| |||||||| |||||||||||||||||||| |||||||||   ||||||||||||
Sbjct: 921 tcctatgaatgagcgtgctacaagaacaatcagaaatctttatacagaaaatgaaagg 978