Jatropha Genome Database

JcCB0431461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0431461.10 - phase: 2 /pseudo/partial
         (378 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m003903 heat shock protein 70kD, putative                       369   e-102

>29726.m003903 heat shock protein 70kD, putative
          Length = 1671

 Score =  369 bits (186), Expect = e-102
 Identities = 312/352 (88%), Gaps = 4/352 (1%)
 Strand = Plus / Plus

                                                                       
Query: 27  atctgatagtgaaaccactggagaggagaaatcttcatcggcttttccagagattgcaat 86
           |||||| |||||||||||||||||||||||||||||||| ||||||||||| | ||| ||
Sbjct: 27  atctgacagtgaaaccactggagaggagaaatcttcatctgcttttccagaaactgccat 86

                                                                       
Query: 87  tggaattgatattggcacttcacaatgcagtgttgcagtctggaatggatcccaggtaga 146
           ||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| || ||
Sbjct: 87  tggaattgacattggcacttcgcaatgcagtgttgcagtctggaagggctcccaagtgga 146

                                                                       
Query: 147 gctccttaggaatacgagaaaccaaaagttgatgcggtcatatgtcaccttcaaggatga 206
           |||||| | |||||| |||||||| ||| ||||||| || |||||||| |||||||||||
Sbjct: 147 gctcctcaagaatactagaaaccagaagctgatgcgatcttatgtcactttcaaggatga 206

                                                                       
Query: 207 tactccttcaggtggagtcagcaatcaactggcccatgagcatgaattgttatctggagc 266
            |   |||||||||||||||| ||||||    | |||||||||||  |||||||||||||
Sbjct: 207 cagcacttcaggtggagtcagtaatcaa---tctcatgagcatgacatgttatctggagc 263

                                                                       
Query: 267 tgcaattttttaatatgaaacgcctgattggcagagtggacactgatccagttgttcatg 326
           ||||| | || ||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 264 tgcaa-tcttcaatatgaaacgtctgattggcagagtagacactgatccagttgttcatg 322

                                                               
Query: 327 ctagcaaaagccttccgtttttggtacagactttggacattggtgttcgccc 378
           | ||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 323 caagcaggagccttccatttttggtacagactttggacattggtgttcgccc 374