Jatropha Genome Database

JcCB0430471.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0430471.10 + phase: 1 /partial
         (581 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006369 conserved hypothetical protein                          311   3e-84

>30169.m006369 conserved hypothetical protein
          Length = 3051

 Score =  311 bits (157), Expect = 3e-84
 Identities = 434/525 (82%), Gaps = 1/525 (0%)
 Strand = Plus / Plus

                                                                        
Query: 56   tgctcccaatcagtgccgcatatgcattgtcacaaagttgtgttgtggtcaagttgtgat 115
            ||||||||| ||||||| |||||||||  |||||| ||||| || |||||||| ||||||
Sbjct: 2524 tgctcccaaccagtgccacatatgcatgctcacaaggttgtattatggtcaagctgtgat 2583

                                                                        
Query: 116  tatcctgcgagccttgtttcaatcaggcatgctagaaagtgactctgaaaccataaaggt 175
             ||| |||| ||  ||||||| || ||||||   || ||| | ||| | |||||||||||
Sbjct: 2584 catc-tgcgggctatgtttcagtcgggcatggcggagagtaattctcagaccataaaggt 2642

                                                                        
Query: 176  gcctgttagctgggaggcaatgactaaatttgtgaactggtgctatacggatgaactgcc 235
            ||| ||||||||||||||||||  |||  | || |||||||| ||||| |||||| | ||
Sbjct: 2643 gccagttagctgggaggcaatggttaagctagttaactggtggtatactgatgaattccc 2702

                                                                        
Query: 236  tagtcctccatctggatgcttgtgggataatatggatactgaggaaaggctatctgtgct 295
            |||||||||||||||||| || |||||||||||||| || ||||||||||||  ||||||
Sbjct: 2703 tagtcctccatctggatgtttatgggataatatggacaccgaggaaaggctaaatgtgct 2762

                                                                        
Query: 296  gcagccatatctagagcttttctggcttgctgaattttggttcttggaagacgttcagga 355
            ||| |||||| ||||||||| ||||||||||||||| ||||| || ||  | ||||||||
Sbjct: 2763 gcaaccatatgtagagctttgctggcttgctgaattctggtttttagagtatgttcagga 2822

                                                                        
Query: 356  tatcagttatagagtgatcatatcttatcttgattctgccagacacttgtctatcaaaat 415
            | |||| |||||| | ||  |||||| ||| || ||||||||||| ||||||||||||||
Sbjct: 2823 tgtcagctatagaataattgtatcttgtctggaatctgccagacatttgtctatcaaaat 2882

                                                                        
Query: 416  tatcaaaatcgcagccgatttatctctttggaagttggttgaagttgctgcaatttactt 475
             || ||||  ||    ||||| ||||||||||| |||||||| || ||||||| |||| |
Sbjct: 2883 gattaaaactgctattgatttctctctttggaaattggttgaggtggctgcaaattacct 2942

                                                                        
Query: 476  ggctcctttatatcgtcaactttgtcactctggtgatcttgaggcactagatgaagaagt 535
            ||| |||   |||||||| |||||  |||||||||| ||||| |  || |||||||||||
Sbjct: 2943 ggcccctcagtatcgtcagctttgcaactctggtgaccttgaagggctggatgaagaagt 3002

                                                         
Query: 536  agttgatatgatacgtgcagcttctgttcggctttctcaagaagg 580
              |||||||||| |||||||| |||||||| ||||| ||||||||
Sbjct: 3003 tattgatatgattcgtgcagcgtctgttcgactttcacaagaagg 3047