Jatropha Genome Database

JcCB0429731.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0429731.10 - phase: 0 
         (372 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29610.m000408 conserved hypothetical protein                          151   3e-36

>29610.m000408 conserved hypothetical protein
          Length = 336

 Score =  151 bits (76), Expect = 3e-36
 Identities = 160/188 (85%)
 Strand = Plus / Plus

                                                                       
Query: 153 ctatgtttacaaaatggaagcaagcaatgtagggttagatggatcagtaaatacattaaa 212
           |||||||||||| |||||||||||| ||||||| |||||||| || ||||| ||| | ||
Sbjct: 99  ctatgtttacaagatggaagcaagcgatgtaggattagatggttctgtaaacacactgaa 158

                                                                       
Query: 213 acttgtggattatggagatgattcaactttagttaattggtcatttcagattgacccttt 272
           ||||||||||||||| |||||||||||  || |||||||||  ||| ||||  |||||||
Sbjct: 159 acttgtggattatggggatgattcaacgctaattaattggttttttgagataaacccttt 218

                                                                       
Query: 273 agaaggtgcttctgaggacaacataatggactatttgggatttctttataaatcatgtat 332
           | ||||||| ||||||||||| || || || ||| | |||||||| |||||||| || ||
Sbjct: 219 acaaggtgcatctgaggacaatatcatcgattatctaggatttctgtataaatcttgcat 278

                   
Query: 333 taatagga 340
           ||||||||
Sbjct: 279 taatagga 286



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 34  ggagatgaaggagttcctggctatgttcggttagtctccggcttcatgttcccccaagaa 93
           |||||||||||| |||| || |||||||| ||||| || || ||||||||||| ||| ||
Sbjct: 28  ggagatgaaggaattccaggatatgttcgattagtttctgggttcatgttccctcaacaa 87

                      
Query: 94  gatggtgaaag 104
           |||||||||||
Sbjct: 88  gatggtgaaag 98