Jatropha Genome Database

JcCB0429031.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0429031.10 - phase: 2 /partial
         (1194 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30054.m000829 conserved hypothetical protein                          250   2e-65

>30054.m000829 conserved hypothetical protein
          Length = 2262

 Score =  250 bits (126), Expect = 2e-65
 Identities = 443/551 (80%), Gaps = 12/551 (2%)
 Strand = Plus / Plus

                                                                        
Query: 642  ctgtagctactggtgttggtgctgggctatctaatcttggcaacacatgctttattaatg 701
            ||||| ||||||| || | ||| ||||| | ||||||||| |||||||||||||||||||
Sbjct: 518  ctgtacctactggggtggctgcggggctgtataatcttgggaacacatgctttattaatg 577

                                                                        
Query: 702  ccatcttgcaatgctttacacatactgttccacttgttaaggctcttcagtcctgcaatc 761
            |  || | ||| | ||||| |||||||| ||||||||||||||||| |  || |||||||
Sbjct: 578  cagtcctacaaagttttacgcatactgtgccacttgttaaggctctccgttcttgcaatc 637

                                                                        
Query: 762  atttgaggccttgccagcgtggtactggaggattttgtgttgtttgtgctcttcatgatc 821
            || ||| ||||||||||||||||  || |||||||||||  || ||||||||||  ||||
Sbjct: 638  atgtgatgccttgccagcgtggtgttgaaggattttgtgccgtctgtgctcttcgagatc 697

                                                                        
Query: 822  atattaagctttctttagcttcttcaggaaagattatttcacctttggaagttgttgata 881
            ||||| | ||||||||| | ||||| |||||   | | |||||||   || |||||||||
Sbjct: 698  atattgaactttctttaacctcttctggaaaagctgtatcaccttccaaaattgttgata 757

                                                                        
Query: 882  acttgaataatatttcatcttgtttccgaagatatcaacaagaggatgctcatgaattcc 941
            | |||||  | ||||||||||||||    | ||| || || || ||||||||||||||||
Sbjct: 758  atttgaaacagatttcatcttgttttgagaaataccagcaggaagatgctcatgaattcc 817

                                                                        
Query: 942  ttcaatgcttattagagaaacttgaaagatgtt------------gtctgaatgatgaga 989
            |||||||||||||||| || |||||||| ||||            |||||| ||| ||| 
Sbjct: 818  ttcaatgcttattagataagcttgaaaggtgttgtctggatccaggtctgagtgacgagg 877

                                                                        
Query: 990  tctcatatccccaagacgataatatagtggagcgggtgtttggaggtcgccttataagca 1049
              |||| | ||| |||  |||| ||||| |||||||| ||||| ||||||||| ||||||
Sbjct: 878  catcatcttccccagagaataacatagttgagcgggtatttgggggtcgccttgtaagca 937

                                                                        
Query: 1050 aactgaaatgttgcaactgtggtgactgttccgataaatacgaacccttgattgacttga 1109
            || ||  ||||||||| |||||| ||||||| ||||| || |||||| | |||||| |||
Sbjct: 938  aattgcgatgttgcaattgtggtcactgttctgataagtatgaaccccttattgacctga 997

                                                                        
Query: 1110 gtttggagattgaagatgtggaaactctacaaaatgctctagaatctttcacgaaggtgg 1169
            |||||||||||||||| |||| || ||| |||| |||| |||| |||||||| ||||| |
Sbjct: 998  gtttggagattgaagacgtgggaaatcttcaaagtgctttagagtctttcaccaaggtag 1057

                       
Query: 1170 aaaaaattgaa 1180
            | |||||||||
Sbjct: 1058 agaaaattgaa 1068