Jatropha Genome Database
- JcCB0428661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0428661.10 - phase: 0 /partial
(1404 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013931 conserved hypothetical protein 779 0.0
29676.m001631 conserved hypothetical protein 66 6e-10
>30170.m013931 conserved hypothetical protein
Length = 2079
Score = 779 bits (393), Expect = 0.0
Identities = 581/643 (90%), Gaps = 3/643 (0%)
Strand = Plus / Plus
Query: 762 gtggcagaaaggaaaactcattggacgtggaacatatggaagtgtttatgttggaaccaa 821
||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1059 gtggctgaaaggaaaacttattggacgtggtacatatggaagtgtttatgttggaaccaa 1118
Query: 822 cagagagactggagctctgtgtgcgatgaaggaagttgatatcatccctgatgatagtaa 881
| |||||||||||||| | ||||| ||||||||||||||||| ||||||| ||| ||
Sbjct: 1119 ccgagagactggagctttatgtgcaatgaaggaagttgatattatccctggtgactccaa 1178
Query: 882 atctgctgaatgcataaagcagctggagcaggaaattagacttctccaacatctaaagca 941
||||| |||||||||||||||||| |||||||| |||||||| |||||||||||| ||||
Sbjct: 1179 atctgttgaatgcataaagcagctagagcaggagattagactcctccaacatctagagca 1238
Query: 942 cccaaatatagtacagtattatggctgtgagatagttgatgatcacttttacatatattt 1001
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1239 tccaaatatagtgcagtattatagctgtgagatagttgatgatcacttttacatatattt 1298
Query: 1002 ggagtatgtttatcctggatcaatcagcaaatttatccgagaacattgtggtggccatat 1061
|||||||||||||||||| ||||||||||||| | |||| ||||||||||| | |||
Sbjct: 1299 ggagtatgtttatcctggttcaatcagcaaatatgtccgtgaacattgtggagc---tat 1355
Query: 1062 gacagagtctatagtccgtaacttcacccgccatattctctctggtttggcttatttgca 1121
|||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 1356 gacagaatctatagtccgtaattttacccgccatattctctctggattggcttatttgca 1415
Query: 1122 tagcaaaaagacagtccacagggacattaaaggagcaaatctgcttgttgattcatcagg 1181
|| ||||||||| | |||||||| ||||||||||||||| |||||||| ||||||||||
Sbjct: 1416 cagtaaaaagacaatacacagggatattaaaggagcaaatttgcttgttaattcatcagg 1475
Query: 1182 cattgttaaactagcagattttgggttggcaaaacatcttactggaccagcatatgaatt 1241
||| ||||| |||| |||||||| ||||||||||||||| ||||| | ||||||||||
Sbjct: 1476 catcgttaagttagctgattttggaatggcaaaacatcttagtggactatcatatgaatt 1535
Query: 1242 gtctttgaaaggcagtccacactggatggctccagaggtcatgaaagctaagatgcagaa 1301
||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 1536 gtctttgaaaggcagtccacattggatggctccagaggtcatacaagctgtgatgcagaa 1595
Query: 1302 agatgccaatcccgatcttgctttggctgttgatatatggagcttgggttgtaccatcat 1361
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 taatgctaatcctgatcttgctttggctgttgatatatggagcttgggttgtaccatcat 1655
Query: 1362 tgagatgtttactggtaaacctccctggggagagcttcaaggg 1404
||| |||||||||||||||||||||||||| |||||| |||||
Sbjct: 1656 tgaaatgtttactggtaaacctccctggggcgagcttgaaggg 1698
Score = 97.6 bits (49), Expect = 2e-19
Identities = 199/249 (79%)
Strand = Plus / Plus
Query: 184 tcaagtcctatggctagtcctcggaagtcaaatgcaggagagttctctcctccctgcaat 243
||||||||| ||| |||||| |||| ||||||||||||||||| ||| || ||| ||||
Sbjct: 481 tcaagtcctctggttagtccacggagatcaaatgcaggagagttttctactaccttcaat 540
Query: 244 actacagattcaactaaatgttcaagcaatcattgcatgggacagtctgatgatctaaat 303
|| | || || ||||||||||||| | | ||| | |||||| | ||||| |||||
Sbjct: 541 gctgcggactcgactaaatgttcaaaaacttgttgtaagggacaattgaatgatttaaat 600
Query: 304 attgaaactgttaattacaagtggaatcggattgcatcacccaggagtgctccaactagc 363
|||||| |||||||||||||| || | |||||| || |||||||| |||||||| ||
Sbjct: 601 attgaatgtgttaattacaagttgagttggattgattctcccaggagcgctccaacaagt 660
Query: 364 agtgtttcaagtcctgctgttagtccacaaagatcatacactggagactttttaccatct 423
|| | ||||| || |||||| || |||||||| |||||| ||||||||||||||||
Sbjct: 661 ggtttctcaagcccaaatgttagccctcaaagatcttacactatagactttttaccatct 720
Query: 424 ttcgtggct 432
|| ||||||
Sbjct: 721 tttgtggct 729
Score = 65.9 bits (33), Expect = 6e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 634 gggagatctaaggagtggcctgagagtaataatcatttcagtgcccacccattacccctt 693
|||| ||| ||||| |||||||||| ||||| ||| || ||||| |||||||| ||||||
Sbjct: 901 gggaaatcaaaggaatggcctgagactaatagtcagtttagtgctcacccattgcccctt 960
Query: 694 cctcctggtgctgcaccaccacaatcatt 722
|||||||| || ||| | ||||| |||||
Sbjct: 961 cctcctggagcagcatcgccacagtcatt 989
>29676.m001631 conserved hypothetical protein
Length = 2130
Score = 65.9 bits (33), Expect = 6e-10
Identities = 478/624 (76%), Gaps = 3/624 (0%)
Strand = Plus / Plus
Query: 762 gtggcagaaaggaaaactcattggacgtggaacatatggaagtgtttatgttggaaccaa 821
||||||||||||||| || ||||| ||||| |||| ||| ||||||||||||| | |||
Sbjct: 1116 gtggcagaaaggaaagctaattgggcgtggtacatttggcagtgtttatgttgccagcaa 1175
Query: 822 cagagagactggagctctgtgtgcgatgaaggaagttgatatcatccctgatgatagtaa 881
|| || ||||| || | || || |||||||||||||| || | || ||||| ||
Sbjct: 1176 tagggaaactggggcattatgcgcaatgaaggaagttgacatgtttccagatgacccaaa 1235
Query: 882 atctgctgaatgcataaagcagctggagcaggaaattagacttctccaacatctaaagca 941
|||||| || | |||||||| | || |||||||||| | ||||| || ||||||||
Sbjct: 1236 atctgcagagtctataaagcaattagaacaggaaattaaagttctcagccacctaaagca 1295
Query: 942 cccaaatatagtacagtattatggctgtgagatagttgatgatcacttttacatatattt 1001
|| || || || ||||||||||| |||| ||||||| || ||||| || |||||| |
Sbjct: 1296 tccgaacattgtgcagtattatggtagtgaaatagttggagaccacttctatatatatct 1355
Query: 1002 ggagtatgtttatcctggatcaatcagcaaatttatccgagaacattgtggtggccatat 1061
||||||||| ||||||| ||||| | |||| | |||| ||||||||||| | |||||
Sbjct: 1356 agagtatgttcatcctggttcaattaataaatatgtccgtgaacattgtggag-ccata- 1413
Query: 1062 gacagagtctatagtccgtaacttcacccgccatattctctctggtttggcttatttgca 1121
||||| | | || |||| || | || || ||||| || || ||||| || |||||
Sbjct: 1414 -acagaaaatgttgttcgtagttttagtcgtcacattctatcaggattggcctacttgca 1472
Query: 1122 tagcaaaaagacagtccacagggacattaaaggagcaaatctgcttgttgattcatcagg 1181
||||| || || | ||||| || || ||||| || ||| |||||||||| |||| ||
Sbjct: 1473 tagcatgaaaacgatacacagagatataaaaggggctaatttgcttgttgacgcatctgg 1532
Query: 1182 cattgttaaactagcagattttgggttggcaaaacatcttactggaccagcatatgaatt 1241
||||||| || || ||||||||| || | |||||||||||||||| ||| |||| |
Sbjct: 1533 agttgttaagcttgctgattttgggatgtcgaaacatcttactggacaggcagctgaact 1592
Query: 1242 gtctttgaaaggcagtccacactggatggctccagaggtcatgaaagctaagatgcagaa 1301
||||||||| || || ||| |||||||||| || ||| | ||| ||||| ||||||||
Sbjct: 1593 gtctttgaagggaagcccatactggatggccccggagcttatgcaagctgtaatgcagaa 1652
Query: 1302 agatgccaatcccgatcttgctttggctgttgatatatggagcttgggttgtaccatcat 1361
||| ||| | |||||||| | |||||||| || ||||| |||| ||||| || ||
Sbjct: 1653 ggataccagctcagatcttgcacttgctgttgacatttggagtctgggctgtactattat 1712
Query: 1362 tgagatgtttactggtaaacctcc 1385
||| ||||| || || ||||||||
Sbjct: 1713 tgaaatgttcacaggaaaacctcc 1736