Jatropha Genome Database

JcCB0427111.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0427111.10 + phase: 0 
         (426 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013971 conserved hypothetical protein                          167   7e-41

>30147.m013971 conserved hypothetical protein
          Length = 570

 Score =  167 bits (84), Expect = 7e-41
 Identities = 180/212 (84%)
 Strand = Plus / Plus

                                                                       
Query: 146 atggaagcaaaaagatttcaaaggaagacttgaagaatcttccatgttttgattacaagg 205
           |||||| ||||||||| ||||| || || ||||||||||| || || |||||||||||||
Sbjct: 152 atggaatcaaaaagatctcaaacgaggaattgaagaatctcccttgctttgattacaagg 211

                                                                       
Query: 206 ttgcagagaaaggagaaagtagccctgtggaatgtgttatttgcttagggaatttcaatg 265
             |||||||||| ||  |||||| ||  ||| || ||  ||||||||| ||| |||||||
Sbjct: 212 cagcagagaaagaagggagtagctcttcggattgcgtagtttgcttagagaacttcaatg 271

                                                                       
Query: 266 taggtgataaatgcagattattgccaaattgcaatcacagctttcatagtcaatgcatag 325
           |||||||||||||||  ||||||||||||||||| |||||||||||   |||||||||||
Sbjct: 272 taggtgataaatgcaagttattgccaaattgcaagcacagctttcactctcaatgcatag 331

                                           
Query: 326 attcgtggttagtgatggctcctatttgtcca 357
           |||| ||||| |||| | ||||||||||||||
Sbjct: 332 attcttggttggtgaagactcctatttgtcca 363