Jatropha Genome Database
- JcCB0426941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0426941.10 + phase: 0
(1359 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29700.m000765 conserved hypothetical protein 478 e-134
>29700.m000765 conserved hypothetical protein
Length = 1938
Score = 478 bits (241), Expect = e-134
Identities = 629/755 (83%), Gaps = 5/755 (0%)
Strand = Plus / Plus
Query: 1 atggcaaaggatcaatcaatttctgttaaagacactgttcataagctccaactttccctt 60
||||||||||| ||||| ||||||| |||||||||||| ||||| | ||||||||||||
Sbjct: 1 atggcaaaggaagaatcagtttctgtgaaagacactgtttataagttgcaactttccctt 60
Query: 61 cttgaaggcattaaaaatgaagatcagctatttacagctggatctttgatgtctcgtagt 120
||||||||||| ||||||| || |||||| | | ||||| ||| ||||||||||||||
Sbjct: 61 cttgaaggcatagaaaatgaggaccagctactagcggctgggtctctgatgtctcgtagt 120
Query: 121 gactacgaagatgttgttacagagcgatcaatagcaaacctgtgtggttatccgctttgc 180
||||| ||||||||||| ||||| ||||| ||||||| ||||||||||| ||||||
Sbjct: 121 gactatgaagatgttgtcgttgagcgttcaatttcaaacctctgtggttatccactttgc 180
Query: 181 aacaattccctgccattggatcgtccttacaagggccgatatcgcatttcgttgaaagag 240
|||||||| ||||||| ||||||||||||||||| ||||| |||||||| ||||| |||
Sbjct: 181 aacaattctctgccatcagatcgtccttacaagggtcgataccgcatttcattgaaggag 240
Query: 241 cataaggtttacgatctacatgagacatacatgtattgctcttccagttgcattgttaat 300
|| | |||||| |||||||| || ||||||||||||||||||||||||||| | || |||
Sbjct: 241 cacagggtttatgatctacaggaaacatacatgtattgctcttccagttgcctagtcaat 300
Query: 301 agtcgagcttttgcaggcagcttacaagaagagagatgctcagttttaaatccaatgaaa 360
||||||||||| | | |||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 301 agtcgagctttctccgaaagcttacaggaaaagagatgctcagttttaaatccaatcaaa 360
Query: 361 cttgatgagatcttaaggatgttcaataatttgagcttggattc-gaaaaatttggtaga 419
||| ||||||| | ||| ||||||| |||||| || ||||| || || || ||
Sbjct: 361 cttaatgagattctgcggaagttcaatgatttgactttagattctgagggtttagggag- 419
Query: 420 aaatggggacttagggttatctaatttgaagattcaagagaagatagaaagtaatgtggg 479
|| ||||||||||||||| ||||||||||||||||| |||||| ||||| ||||| ||
Sbjct: 420 aagtggggacttagggttgtctaatttgaagattcaggagaagtcagaaaccaatgttgg 479
Query: 480 tgaggtatcattggaagagtggattggtccatcaaatgcaattgaaggctatgttccaca 539
| || || ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 480 gaaagtgtctttggaagagtggattggtccatcaaatgcaattgagggctatgttccaca 539
Query: 540 aagagatcgtgacttcaagggttcatcattcaaaaatcccaaagaagcatcaaaagctat 599
| |||||||||| ||| | | ||||| ||||||| ||||||| || |||||||||
Sbjct: 540 aggagatcgtgatcccaa---tccttcattaaaaaatcataaagaaggattaaaagctat 596
Query: 600 cagtaccaaaccagtcaataagcaagaatgtttctttaatgacatggattttatgagcac 659
| ||| |||||||||| ||| ||||| |||||||||| ||||| ||| || | || ||
Sbjct: 597 ctgtaagaaaccagtcagtaaacaagattgtttctttagtgacacggacttcacaagtac 656
Query: 660 tataataactaaagatgagtacagcatttcaaaagctccctctggttcaattagcactgg 719
|||||| || || ||||| || ||||||||||||| ||||||||| | | |||||||
Sbjct: 657 tataatcacaaatgatgaatatagcatttcaaaaggtccctctggcttgacaagcactgc 716
Query: 720 ctctgatatgaaattacaagaacaaagggggaaag 754
|||||| || |||||||||| ||||| |||||||
Sbjct: 717 ctctgacattaaattacaagcacaaacagggaaag 751
Score = 143 bits (72), Expect = 3e-33
Identities = 230/282 (81%), Gaps = 3/282 (1%)
Strand = Plus / Plus
Query: 960 agcagctaatttaagtgaatctatgctcaaaccctctcttaaaccttctggtgcaaagaa 1019
|||||| ||||| | |||||| |||||||||||||||| ||| ||||||| |||||||
Sbjct: 930 agcagcgaatttgaatgaatcagtgctcaaaccctctctcaaatcttctggggcaaagag 989
Query: 1020 atctgttcattctgttacttgggctgatgagaaatttgataacgctaaaagtagaaatct 1079
|||| || || || || ||||||||||||| | ||||||| ||| ||||||||| ||
Sbjct: 990 atctaatcgctccgtcacctgggctgatgagagagttgataatgctggaagtagaaacct 1049
Query: 1080 ttgtgaggttagagaaatggaagatacaaagtctggtcttgagattttagacagtttgga 1139
|||||||||| ||||||||| | ||||| ||| |||||||| ||| ||| | |
Sbjct: 1050 ttgtgaggttcaggaaatggaacagacaaatgaaagtcatgagatttcagagagtgcgaa 1109
Query: 1140 gaaca---ataatgataacatgttgcgttttgaatcagcggaagcctgtgcaatagcatt 1196
|| || ||| | ||||||||||||| |||||||| |||||||||||| |||||||
Sbjct: 1110 caagggggatgatggtcacatgttgcgtttcgaatcagcagaagcctgtgcagtagcatt 1169
Query: 1197 gagccaggcggcagaagctgttgcatctggagatgctgatgt 1238
||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1170 gagccaggcagcagaagctgttgcatctggagatgcagatgt 1211