Jatropha Genome Database

JcCB0426111.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0426111.10 - phase: 0 /partial
         (356 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29719.m000333 4-alpha-glucanotransferase, chloroplast precursor,...   406   e-113

>29719.m000333 4-alpha-glucanotransferase, chloroplast precursor,
            putative
          Length = 1755

 Score =  406 bits (205), Expect = e-113
 Identities = 307/341 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gctggacctgggaaatctctatttgatgccatctctggtgcttttggaaatatcagaata 60
            ||||| ||||||||||| ||||||||||||||| |  | ||| ||||||| ||||| |||
Sbjct: 1201 gctgggcctgggaaatccctatttgatgccatcaccagagctgttggaaagatcagcata 1260

                                                                        
Query: 61   atagcagaggatttgggagttattactgaggatgtcgtgcagcttaggaaatctattggt 120
            ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 1261 atagcagaggatttgggagttatcactgaggatgtagtacagcttagaaaatctattggt 1320

                                                                        
Query: 121  gctcctggaatggctgtccttcagtttggtttcggaagcgatgcagataaccctcattta 180
            ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1321 gctcctggaatggctgttcttcagtttggttttggaagtgatgcagataaccctcattta 1380

                                                                        
Query: 181  cctcataatcatgaagccaatcaagttgtatacactggaactcatgataatgacacgact 240
            |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1381 cctcataatcatgacgcaaatcaagttgtatacactggaactcatgataatgacacgatt 1440

                                                                        
Query: 241  cgaggctggtgggataatttgaagaaaagggagaagtcaaatgtactgaagtatctttca 300
            ||||| ||||||||     | ||| ||  |||||||||||||||| ||||||||||||||
Sbjct: 1441 cgaggttggtgggacgtgataaagcaagaggagaagtcaaatgtattgaagtatctttca 1500

                                                     
Query: 301  attactgaagaagatgatatgccatgggcactcatccaagc 341
            ||| ||||||||||||| || ||||||||||||||| ||||
Sbjct: 1501 attgctgaagaagatgagatcccatgggcactcatcaaagc 1541