Jatropha Genome Database

JcCB0425721.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0425721.10 - phase: 0 /pseudo/partial
         (1335 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005368 Regulatory protein NPR1, putative                      1015   0.0  

>29912.m005368 Regulatory protein NPR1, putative
          Length = 1770

 Score = 1015 bits (512), Expect = 0.0
 Identities = 1063/1245 (85%), Gaps = 10/1245 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggataataggattggattctctgattcgaacgagatcagcaatggaagcagcacctgt 60
            |||||| |||||||||| ||||||||||| ||||| || || |||||||||||||  || 
Sbjct: 1    atggattataggattggtttctctgattcaaacgaaattagtaatggaagcagcagttgc 60

                                                                        
Query: 61   tgcatagaaaccctctctactccaaaccc------tccaaacccagaaatctctgctctt 114
            || ||||||||||| || | |||||| ||      |||||| |||||||| || ||||| 
Sbjct: 61   tgtatagaaaccctttcaaatccaaatccaccaattccaaatccagaaatttcagctctc 120

                                                                        
Query: 115  caacagctctctaaaagccttgaatccatctttgactcttcagattttgactttttcgcc 174
            ||||||||||| | ||||||||| |||||| |||| || | |||||||||||| |  || 
Sbjct: 121  caacagctctcgagaagccttgagtccatcattgaatcattagattttgacttctatgct 180

                                                                        
Query: 175  gacgctaaaatcacaatctccgcctctaaccgggaggtcccggtccaccggtgcattcta 234
            || || ||||| |||||||| ||||||||  | |||||||| || |||||||||||| ||
Sbjct: 181  gatgccaaaattacaatctctgcctctaatagagaggtccctgttcaccggtgcatttta 240

                                                                        
Query: 235  tcggcgagaagtcctttctttaaggcagtgttttcgggttctgcagccaaagagaaaggt 294
            || |||||||||||||||||||||||  ||||||| ||||||   |  ||||||||||||
Sbjct: 241  tcagcgagaagtcctttctttaaggctatgttttcaggttctctgggtaaagagaaaggt 300

                                                                        
Query: 295  caa---aattttgaagtgaaagagttggccaaagactatgatattgggtttgattcgatt 351
                  || | |||| |||| |||||| |||| || |||||| |||||||||||||  | 
Sbjct: 301  gctgtcaagtatgaactgaaggagttgaccaaggattatgatgttgggtttgattctctg 360

                                                                        
Query: 352  gtaacagttttgagctatttgtataatggaaaagtgaggccgttgcctaaaggcgtttgt 411
            ||  | |||||| | |||||||||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 361  gtggccgttttgggttatttgtatagtggaaaagtgaggcctttgcctaaaggtgtttgt 420

                                                                        
Query: 412  gtttgcgtggatgaagattgctcccatgtggcttgtagaccagctgtggattttatggtt 471
            ||||| || |||||||||||||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 421  gtttgtgttgatgaagattgctcccatgttgcttgtaggcctgctgttgatttcatggtt 480

                                                                        
Query: 472  gaggtgctatatgctgcttttacgtttcaggttcctgaattggtggctctctaccagagg 531
            ||||||||||||||  ||||||| |||||||| |||||  | ||||||||||| || |||
Sbjct: 481  gaggtgctatatgcatcttttacttttcaggtgcctgagctagtggctctctatcaaagg 540

                                                                        
Query: 532  caccttctagacattcttgaaaaggttgcaattgatgatatcttggtggttctatctgtt 591
            || ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 541  catcttctagacattcttgacaaggttgcaattgatgacatcctggtggttctatctgtt 600

                                                                        
Query: 592  gcaaatatttgtggtaaagcgtgtgagaaattgttgacaagatgtattgagatcgttgtg 651
            |||||||  ||||||||||| ||||||| ||| || ||||||||||| |||||| |||||
Sbjct: 601  gcaaatacgtgtggtaaagcttgtgagagattattcacaagatgtatcgagatcattgtg 660

                                                                        
Query: 652  aaatcatatgttgatattgtaactcttgacaaggcattaccccaaaacattgtaaagcaa 711
            |||||  ||| ||||||||||||||| || ||||| ||||||||| ||||||||||||||
Sbjct: 661  aaatctgatgctgatattgtaactctggataaggccttaccccaacacattgtaaagcaa 720

                                                                        
Query: 712  attacagattctcgtttagagattgcttcagacacacctcaaaccacaagttatcctgat 771
            |||||||||||||| | |||| ||| ||  ||||||||| ||| |||| |||||||||||
Sbjct: 721  attacagattctcgctcagagcttggtttggacacacctgaaagcacaggttatcctgat 780

                                                                        
Query: 772  aaacatataaagagaatacatcgagctttggactcagatgatgtggaattagttagaatg 831
            |||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 781  aaacatgtaaagagaatacatcgagcgttggactcggatgatgtagaattagttaggatg 840

                                                                        
Query: 832  ctactgaaagaggcacataccaatttggatgatgctcatgctctccattatgctgttgca 891
            || ||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||
Sbjct: 841  ctgctgaaagaggcacataccaatctggatgatgcacatgcactacattatgctgttgca 900

                                                                        
Query: 892  tattgcgacgcgaagacgaccactgaacttcttgatcttggtattgctgatgttaactgt 951
            ||||| || || |||||||| || || |||||||||||||| ||||||||||| ||||| 
Sbjct: 901  tattgtgatgcaaagacgacaacggagcttcttgatcttggaattgctgatgtcaactgc 960

                                                                        
Query: 952  agaaatttaaggggatacactgtacttcatgttgctgcaatgcgaaaagagcctaagatt 1011
            ||||| | |||||| |||||||| ||||||||||| |||||| | |||||||||| ||||
Sbjct: 961  agaaactcaaggggctacactgtgcttcatgttgccgcaatgaggaaagagcctaggatt 1020

                                                                        
Query: 1012 atagtctctctgttaactaagggagctcgaccatcagatcttacttccgatggcagaaaa 1071
            || ||  | || || || ||||||||||| || |||||||| ||||| |||||  |||||
Sbjct: 1021 attgtaacactcttgacaaagggagctcggccgtcagatctcacttcagatggtcgaaaa 1080

                                                                        
Query: 1072 gcactccaaatctcaaagagacttactagagcttcagattactataaatctattgaggaa 1131
            ||||| |||||||| |||  ||||||||||||| ||||||||||||| || | |||||||
Sbjct: 1081 gcacttcaaatctcgaagcaacttactagagctgcagattactataagtccactgaggaa 1140

                                                                        
Query: 1132 gggaaagcttctcccaaggagagattatgtatagagatattagaacaagctgaaagaaga 1191
            || ||||||||||||||||| |||||||| |||||||| || || ||||| |||||||||
Sbjct: 1141 ggaaaagcttctcccaaggaaagattatgcatagagatcttggagcaagcagaaagaaga 1200

                                                         
Query: 1192 gatccattgcttggagaggctttctctttctcttgctatggctgg 1236
            |||||||| | || |||||| ||||||||||||||||||||||||
Sbjct: 1201 gatccattacatgtagaggc-ttctctttctcttgctatggctgg 1244



 Score = 89.7 bits (45), Expect = 4e-17
 Identities = 77/85 (90%), Gaps = 2/85 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1240 ttggactggcaaaaattctattccccatggaagcaaaagttgcaatggatattgcttcaa 1299
            |||||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 1286 ttggactggcaaaacttctattccctatggaagcgaaagttgcaatggatattgc-tcaa 1344

                                     
Query: 1300 gttggatggaactaatgaatttcca 1324
            | ||||||| ||  |||||||||||
Sbjct: 1345 g-tggatggtacatatgaatttcca 1368