Jatropha Genome Database
- JcCB0425521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0425521.10 + phase: 0 /partial
(1254 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29815.m000502 conserved hypothetical protein 533 e-151
30169.m006420 transcription factor, putative 54 2e-06
29576.m000226 transcription factor, putative 52 8e-06
>29815.m000502 conserved hypothetical protein
Length = 1500
Score = 533 bits (269), Expect = e-151
Identities = 547/639 (85%), Gaps = 15/639 (2%)
Strand = Plus / Plus
Query: 16 ccaaaaccacaatcaccacctagtgatgaagatgagcat---tttattggagatgatgtg 72
||||| ||||||||||||| ||||||||||||||||| | |||| ||||||||||
Sbjct: 241 ccaaagccacaatcaccacttagtgatgaagatgagcctggttttactggagatgatagc 300
Query: 73 actagtgatggaaaaagaaagatgtctccttggcaaaggatgaaatggactgatagtatg 132
|| ||||||| ||||| ||| | ||||| |||||||| ||||| |||||||| ||||||
Sbjct: 301 acaggtgatgggaaaaggaaggtctctccatggcaaagaatgaagtggactgacagtatg 360
Query: 133 gttaggcttcttataatggcagtattttatattggtgatgaggctggatctgaagtgaat 192
||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||
Sbjct: 361 gttaggcttcttataatggcagtgttttatatcggtgatgaggctggatctgaagggaat 420
Query: 193 ---gatccca---cggggnnnnnnnnggc---tggtgggttatcacaaaagaaagggaaa 243
||||||| | || ||| |||||| |||||||| ||||||||||||
Sbjct: 421 aacgatcccagtactggcaagaagaaggcaggtggtggattatcacagaagaaagggaaa 480
Query: 244 tggaaatctgtttcaagagcaatgatggaaaaaggattttatgtatctcctcaacaatgt 303
|||||||| |||||||| ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 481 tggaaatcagtttcaagggcaatgatggagaaagggttttatgtatctccacaacaatgt 540
Query: 304 gaggataaatttaatgacttgaataaaaggtataagagggtgaatgatatacttgggaaa 363
||||| ||||| |||||||||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 541 gaggacaaattcaatgacttgaataagagatataagagggttaatgatatacttggcaaa 600
Query: 364 ggaactgcttgtaaggttgtggagaatcaaagtttgcttgaaacaatggatttgtcacca 423
||||| ||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 601 ggaacagcttgcaaggtggttgagaatcaaagtttacttgagacaatggatttgtcacca 660
Query: 424 aaaatgaaagaagaagtgaaaaaattgttgaattctaaacacttgttttttagagaaatg 483
|||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 661 aaaatgaaggaagaggtgaaaaaattgttgaattctaagcacttgttttttagagaaatg 720
Query: 484 tgtgcttatcataatagttgcggtcatggatcgagtggagttgcttctggtactactaat 543
|||||||||||||||||||| |||||||| || | ||| |||| ||||| ||| |||
Sbjct: 721 tgtgcttatcataatagttgtggtcatggctcaaatgggattgcgtctgg---tacaaat 777
Query: 544 cactcaccagaagttgctactgaccaatctcatgctcaacacccacacgcatctcatgtt 603
|| || |||||| | || || || ||||||||| ||||||| | || |||||||| ||
Sbjct: 778 cattcgccagaaatagccacagatcaatctcatcctcaacatcagcaagcatctcacctt 837
Query: 604 cagcagcaaaggtgttctcattcatctgaaaatgcccaa 642
||||| |||||||| ||||||||| ||||||||||||||
Sbjct: 838 cagcaacaaaggtgctctcattcaactgaaaatgcccaa 876
Score = 240 bits (121), Expect = 2e-62
Identities = 369/455 (81%), Gaps = 15/455 (3%)
Strand = Plus / Plus
Query: 814 catggacatgaagatgaagatgatcatgaagagaaaccttcgcgaaagaggcaaagaact 873
||||||||||| || ||||| ||||| || || |||||| | | ||| |||||||||||
Sbjct: 1042 catggacatgaggacgaagaggatcacgaggaaaaacctgctcaaaaaaggcaaagaaca 1101
Query: 874 ggaatatttgctttatcatcatctttgatgcagcaattgagtagtgaattagttagtgtt 933
||| | | |||||||||||||||||||||||||| ||| |||||||| | | ||
Sbjct: 1102 ggagtgcattctttatcatcatctttgatgcagcaactgaacagtgaattgatgggggtg 1161
Query: 934 attcaagacggagcaaaaagtccatgggagaagaagcattggatgaaagtaagattaatg 993
|| ||||| |||||||| |||||||||||||||||||| |||||||| | |||| ||||
Sbjct: 1162 atccaagatggagcaaagagtccatgggagaagaagcactggatgaagctgagatcaatg 1221
Query: 994 gaattagaagagcagcaagtgagctatcaacgccaagcacttgaacttgaaaagcaaagg 1053
| ||||||||||||||| ||||||| ||| |||||||| | || || ||||||||||||
Sbjct: 1222 cagttagaagagcagcaattgagctaccaatgccaagcattcgagctcgaaaagcaaagg 1281
Query: 1054 ctaaagtgggtgaaatttagtagcaagaaagaaagggaaatggaaagagctaaattagag 1113
|| ||||||||||| || || ||||||||||| ||||||||||| | ||| ||| ||||
Sbjct: 1282 ctgaagtgggtgaagttcagcagcaagaaagagagggaaatggagaaagcaaaactagat 1341
Query: 1114 aatgaaaggaggagacttgaaagtgaaagaatggtacttcttgttagacagaaagagctt 1173
||||| ||||| | || || |||||||||||||||||||| | | || |||||||||
Sbjct: 1342 aatgataggagaatgctggagagtgaaagaatggtacttctgatacgccaaaaagagctt 1401
Query: 1174 gaattgcttgatct---------------tcaccatcatcagcaacagcaacaactttct 1218
|||||||||||||| ||| ||||| || ||||||||||||||||||
Sbjct: 1402 gaattgcttgatctgcaacaacagcaacatcatcatcaccatcaacagcaacaactttct 1461
Query: 1219 tcaaacaagagaagtgacccatcttccattactgg 1253
|| |||||||| |||||||||||||||| |||||
Sbjct: 1462 tcgaacaagaggggtgacccatcttccatcactgg 1496
>30169.m006420 transcription factor, putative
Length = 1365
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 97 tctccttggcaaaggatgaaatggactgatagtatggttaggcttcttata 147
||||| ||||| ||||||||||||| |||| | |||||||||||||||||
Sbjct: 349 tctccatggcagcggatgaaatggacagataatgtggttaggcttcttata 399
>29576.m000226 transcription factor, putative
Length = 1338
Score = 52.0 bits (26), Expect = 8e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 292 cctcaacaatgtgaggataaatttaatgacttgaataaaaggtataagagggtgaatgat 351
||||| ||||| ||||||||||| |||||| | || ||||||||||| || | |||||
Sbjct: 529 cctcagcaatgcgaggataaattcaatgaccttaacaaaaggtataaaagacttaatgac 588
Query: 352 atacttggga 361
||||||||||
Sbjct: 589 atacttggga 598