Jatropha Genome Database
- JcCB0425011.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0425011.10 + phase: 0
(1668 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013888 pentatricopeptide repeat-containing protein, putative 775 0.0
>30147.m013888 pentatricopeptide repeat-containing protein, putative
Length = 1287
Score = 775 bits (391), Expect = 0.0
Identities = 924/1099 (84%), Gaps = 2/1099 (0%)
Strand = Plus / Plus
Query: 291 aacagaaacaaaacctgataacttcacttatgcttgtcttatacgagggtgccatgaaaa 350
||||| || |||||||||||| | ||| |||| |||||||| |||| |||||||| ||
Sbjct: 9 aacaggaataaaacctgataattatactcatgcgtgtcttattcgagcttgccatgagaa 68
Query: 351 ttttgatcttgatggtttgagaattttacatggaggtttaattgtttctgggttaggttt 410
|||||| | |||||||| ||| ||||||||||||| ||||||||||||| || || |
Sbjct: 69 ctttgatttggatggtttaagagttttacatggaggagtaattgtttctggattgggaat 128
Query: 411 ggattctgtttcctctagtgcattagtgacagcttactcaaaattcagtcatgttagtga 470
||||| ||||| | |||||||||||| || ||||| |||||| | | ||||| ||||
Sbjct: 129 tgattccgtttcttgtagtgcattagttactgcttattcaaaaatgaactatgttcgtga 188
Query: 471 agcaagcaaggttttttctgggatttttgagcgggatttggttctatgtaatgccatgat 530
|||||| || || ||| |||||||| |||| |||| ||||| |||| ||| | |||||
Sbjct: 189 agcaagtaaagtgtttaaggggattttcgagccggatatggttttatggaattctatgat 248
Query: 531 ttctggctatagttattgtggattttggggtaaagggttacagttgtttaatggaatgag 590
|||||| ||||||||||||||||||||| |||||| || ||||||||||| |||| |
Sbjct: 249 ttctggttatagttattgtggattttggaataaaggattggagttgtttaatcaaatgcg 308
Query: 591 agaaatagggaagcaacagccagatgggtttactttggttgggcttatctcaggtttaat 650
||||| ||||||| |||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct: 309 agaaaataggaagcagcagccagatgggttcactttggttggacttatttctggtttaat 368
Query: 651 ggattttagtctgctgggaattggccaaggaattcatgggctctgcttgaaaagtggttt 710
|||||||||| |||| ||||||||||||| ||||||| || |||||||||| ||||||
Sbjct: 369 ggattttagtttgctacgaattggccaaggggttcatggtctttgcttgaaaactggttt 428
Query: 711 tgattgcaatgcctatgtaggcagtgcacttgtaaacatgtattcaagattcaagtgcat 770
| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 429 taattgcaatgcctatgtaggtagtgcacttgtaagtatgtattcaagattcaagtgcat 488
Query: 771 gaattcagcatatggtgtttttatcggtttatatcagcctgatttagttgcatggtccgc 830
|||||||||||| |||||||| | |||||| |||||||||||||||||||||||| ||
Sbjct: 489 taattcagcatataatgtttttagcagtttatgtcagcctgatttagttgcatggtctgc 548
Query: 831 tttgataaccggatttttgcagtgtgaagattataagaaagctcttttcttctataggaa 890
|||||||||||| | || |||| || ||||||||| || || | | || | || |||
Sbjct: 549 tttgataaccgggtattctcagtctggagattataacaaggcattggtgttttgtacgaa 608
Query: 891 tttgtctgtggcaggtaagaaggcagatccaattctgattgctagtttattggtggcttc 950
| | | || | |||||| |||||||||||| || ||||||| ||| ||||||||||| |
Sbjct: 609 tctatgtggcgaaggtaaaaaggcagatccagttttgattgccagtgtattggtggctgc 668
Query: 951 tgctcaattaacagatgtgcggcttggtactgagatacatggttatgttcttcgacatgg 1010
||| | || ||||| | ||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 669 tgcacgtttggcagatttagggcatgggactgagatacatggttatgttcttcgacatgg 728
Query: 1011 attggaatctaatatcatcgtttcttctgctcttatagatatgtatttgaagtgtggttt 1070
||| |||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 729 atttgaatctgatatcatggtttcttctgctcttatagatatgtatatgaagtgtggttt 788
Query: 1071 tgtggggttaggtattcttgtttttgagaatatgcgcaacagaaatattgtttcctacaa 1130
||||| | || || | ||| ||||| ||||| |||||| |||||| ||||||||||
Sbjct: 789 agtgggatgggggatccgtgtctttgacaatatccgcaaccaaaatatcatttcctacaa 848
Query: 1131 ttcagtaatttctggtcttggcttgcatggacttgctgctcaggcttttaaactgtttga 1190
|||||||||| |||||||| || |||||||||||||||||||| ||| ||||||| ||
Sbjct: 849 ttcagtaattctgggtcttggtttacatggacttgctgctcaggcatttgaactgttcga 908
Query: 1191 agagatgctagagaaaggtttgaaacctgatgaatccacattatctggcctcctttgtgc 1250
|||||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||
Sbjct: 909 agagatgctagagaaaggactaaaacctgatgaatctacattctctactctcctttgtgc 968
Query: 1251 ttgttgtcatgctggccttgttaaagatggccag-gaaattttcagaagaatgatggatg 1309
||| ||||||||||| ||||| |||||||| | ||| || | || | |||||||||||
Sbjct: 969 ttgctgtcatgctggacttgtgaaagatggttggagaatttataagca-aatgatggatg 1027
Query: 1310 aattttgcatcccacctagaacggaacattatattcacattgtaaagctcctaggaatgg 1369
| |||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||
Sbjct: 1028 agttttgcatcccacctagaactgagcattatgttcacattgtaaagctcctagggatgg 1087
Query: 1370 caggggagttggaagaggc 1388
| |||||||||||| ||||
Sbjct: 1088 ccggggagttggaaaaggc 1106