Jatropha Genome Database
- JcCB0424661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0424661.10 + phase: 2 /pseudo/partial
(1015 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29506.m000171 EXECUTER1 protein, chloroplast precursor, putative 535 e-151
>29506.m000171 EXECUTER1 protein, chloroplast precursor, putative
Length = 2028
Score = 535 bits (270), Expect = e-151
Identities = 537/626 (85%)
Strand = Plus / Plus
Query: 375 gtgaaagtgaccaagaaagagatgagattgaaattgatgctgctcgtgaaatcattgaca 434
|||||||||||||||||| ||||||||||||||| ||||||| || || ||| || ||
Sbjct: 1130 gtgaaagtgaccaagaaaaagatgagattgaaatggatgctgttcatggaattatagagg 1189
Query: 435 gtgaagggccaagtgaaatttcgtttaaagttgttgttgggggtcttgctcagaaatttt 494
|| || || ||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 1190 acgatggaccgagtgaaatttcagttaaagttgttgttggaggtcttgctcagaaatttc 1249
Query: 495 caggaagcatgcctgtaaaagagtcacttagagttcctgctaagctagagaaaaagggac 554
| ||||| | ||| ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1250 cgggaagtgtcccttcaaaagagtcgcttagagtgcctgctaagctagagaaaaagggaa 1309
Query: 555 gaaggtcatttttgttttctatagagaaagatgtcaaccaacaggattctggtgctaagg 614
| ||||||||| ||||| || |||||||||||||| ||||||||| ||||||| ||||
Sbjct: 1310 ggtggtcattttcattttcaatcgagaaagatgtcaatcaacaggatcctggtgccaagg 1369
Query: 615 aagcagcctcagcagatagaaaagctaagtttcaaggtcaacgtagtgtggataatatta 674
||||||||||| ||||||||||| ||||| ||||||||||| |||| |||| ||||
Sbjct: 1370 gagcagcctcagtggatagaaaagccaagttgcaaggtcaacgcagtgcagatagcatta 1429
Query: 675 tgttggaccttgctaaattcattggcaaggaaaagatacccttgaaggtgctgaaagatg 734
||||||| || || || ||||||||| |||| ||||||||| ||||||| || |||||||
Sbjct: 1430 tgttggatctcgccaagttcattggccaggagaagatacccatgaaggtactcaaagatg 1489
Query: 735 ttggtgacttaataaatttcacccttagtcaggctcaaaaccgtcagccattgtctggat 794
| | ||||| |||||||| ||||| ||||||||||||||||| || ||| | |||||||
Sbjct: 1490 tcagggacttgataaattttaccctcagtcaggctcaaaaccggcaaccactttctggat 1549
Query: 795 caacaactttccatcggattgagatatcagcatctccagaccctctgaatggattatata 854
|||||||||||||||||||||| | ||||||||| ||||| ||||| |||||| ||||||
Sbjct: 1550 caacaactttccatcggattgaaacatcagcatcaccagatcctctaaatggactatata 1609
Query: 855 ttggagcacatgggctgtacagttcagaagtcatacagctgcaacgcaaatttggacaat 914
|||| |||||||||||||||| |||||||||||||| ||||| || |||||||| || |
Sbjct: 1610 ttggggcacatgggctgtacacctcagaagtcatacatctgcagcgtaaatttggtcagt 1669
Query: 915 ggcaagatgagcgtgggacaaaccagccttccaatgtagagttctatgaatatgtggaag 974
|||||||||| |||||||| || | || || ||| ||||||||||||||||||| ||||
Sbjct: 1670 ggcaagatgatcgtgggaccaaggaaccatctaatctagagttctatgaatatgtagaag 1729
Query: 975 ctgtaaaattaactggagatccatat 1000
|||||||| |||||||||||||||||
Sbjct: 1730 ctgtaaaactaactggagatccatat 1755
Score = 208 bits (105), Expect = 5e-53
Identities = 253/301 (84%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 2 ctgtgtacttgaaaaggaaaggccttctccaagatccttcaacagtctcctctaaaagca 61
||||||| || |||||||| || ||| |||||| ||||||||||| ||||||||| |||
Sbjct: 758 ctgtgtatttaaaaaggaagggactttcccaagacccttcaacagtttcctctaaa-gca 816
Query: 62 ccaggtgccacgagccgcttaaatccaccagggcctactgaaggaaaaagtgatctattt 121
|| ||||| | |||||| | ||||||||||| || ||||||| |||||| ||| |||||
Sbjct: 817 ccgggtgcacccagccgcatgaatccaccaggtccaactgaagaaaaaagcgatttattt 876
Query: 122 gttgtgagcactgaagagactgagaatggcgatgacacagaagatggttctgatcttgct 181
|| |||||||||||||| ||||| |||| ||||| || ||||||||||||||| | |||
Sbjct: 877 gtggtgagcactgaagatactgacgatggtgatgagacggaagatggttctgatatcgct 936
Query: 182 gagggattacctggttttcagaatattttacgagatatgattcctggtatgaagctcaag 241
|||||| | ||||| ||||||||||| || ||||||||| ||||||| | ||| |||||
Sbjct: 937 gagggactgcctggatttcagaatatcttgcgagatatggttcctggagtaaaggtcaag 996
Query: 242 gttttgaaagtgacaacacctgcgaaggtagataaggattttatatctaaggtgattgaa 301
|||||||||||||||||| || | |||||||| | ||| || |||||||| ||||| |||
Sbjct: 997 gttttgaaagtgacaacatcttcaaaggtagacagggacttcatatctaaagtgatagaa 1056
Query: 302 c 302
|
Sbjct: 1057 c 1057