Jatropha Genome Database

JcCB0424221.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0424221.20 - phase: 2 /partial
         (286 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004752 two-component sensor histidine kinase bacteria, pu...   123   6e-28

>29929.m004752 two-component sensor histidine kinase bacteria,
            putative
          Length = 1755

 Score =  123 bits (62), Expect = 6e-28
 Identities = 128/150 (85%)
 Strand = Plus / Plus

                                                                        
Query: 99   ctttggatgatgactttcaggtctgttggtttcaaggtgattgttatgctatgaatcttg 158
            ||||||||||||||||||| ||||| |||||||||||||||| |||||| |||||| |||
Sbjct: 1538 ctttggatgatgactttcaagtctgctggtttcaaggtgattattatgccatgaatgttg 1597

                                                                        
Query: 159  gactccacaatattgagctgccagagtactgtgatccagggctcataactgaagttccaa 218
            ||| ||| || |||||||| |||||| | | ||| || ||||||||  |||| |||||||
Sbjct: 1598 gacgccaaaacattgagcttccagagaattatgaccccgggctcattgctgatgttccaa 1657

                                          
Query: 219  cacatttacatgatgcagtgaggtttgact 248
            |||| ||  |||| ||||| ||||||||||
Sbjct: 1658 cacacttgtatgacgcagtcaggtttgact 1687