Jatropha Genome Database

JcCB0423721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0423721.10 + phase: 0 /partial
         (486 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27810.m000636 conserved hypothetical protein                          210   6e-54

>27810.m000636 conserved hypothetical protein
          Length = 3165

 Score =  210 bits (106), Expect = 6e-54
 Identities = 225/265 (84%), Gaps = 6/265 (2%)
 Strand = Plus / Plus

                                                                        
Query: 149  agaaatttgaaagcataatgtcagaatatgggatgcagatatcacgtattcttttatcac 208
            ||||||||||||  | ||||||||| |||||||||||||||||||||||||| ||||| |
Sbjct: 1040 agaaatttgaaattacaatgtcagagtatgggatgcagatatcacgtattctcttatctc 1099

                                                                        
Query: 209  agcttcactgtgctgatgaagatgtggttgctgcggctgtttgcatacttaagaaatcca 268
            ||||||| ||| ||||||||||||| || || | ||||||||||||| ||||| || |||
Sbjct: 1100 agcttcattgtactgatgaagatgtcgtagccgtggctgtttgcatatttaaggaagcca 1159

                                                                        
Query: 269  tatttaaaccaaattattcatctggaaaagacctcacagacagcagacagatggatgtgt 328
            |||||||||||||| ||||||||||      ||   | |||||||||||||||||||  |
Sbjct: 1160 tatttaaaccaaataattcatctgg------ccgtgctgacagcagacagatggatgcat 1213

                                                                        
Query: 329  tgttgccttcattgcttaaccttctagatgagaatgatggcatagctagagctgttgtta 388
            || | ||||  ||||| ||||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 1214 tgctacctttgttgctaaaccttctagatgagcaggatggcataactagagctgttgtta 1273

                                     
Query: 389  tgcttatagcagaatattgctccat 413
            || | || |||||||| ||||||||
Sbjct: 1274 tgttaattgcagaatactgctccat 1298