Jatropha Genome Database
- JcCB0421541.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0421541.10 + phase: 0
(588 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29933.m001381 r2r3-myb transcription factor, putative 135 3e-31
29631.m001031 r2r3-myb transcription factor, putative 54 1e-06
28226.m000839 r2r3-myb transcription factor, putative 54 1e-06
30147.m013953 conserved hypothetical protein 52 4e-06
28154.m000040 r2r3-myb transcription factor, putative 52 4e-06
>29933.m001381 r2r3-myb transcription factor, putative
Length = 543
Score = 135 bits (68), Expect = 3e-31
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 17 aatacaagaaaggcttatggacagaggaagaagacaagatcctgatggactatgtaaacc 76
||||||||||||| |||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 20 aatacaagaaaggattatggacagaggaagaagacaagattctcatggactatataaacg 79
Query: 77 ttcatgggaaaggaaaatggaatcacatttcaaagaagac 116
||||||||||||||| ||||||||||||| | ||||||||
Sbjct: 80 ttcatgggaaaggaagatggaatcacattgcgaagaagac 119
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 249 gtggtcactgattgcaaaacgagtgcctggaagaactgacaatcaagtgaagaactactg 308
||||||||||||||| || || |||||||| |||||||||||||||| ||||| |||||
Sbjct: 150 gtggtcactgattgccaagcgggtgcctgggcgaactgacaatcaagtaaagaattactg 209
Query: 309 gaatac 314
||||||
Sbjct: 210 gaatac 215
>29631.m001031 r2r3-myb transcription factor, putative
Length = 267
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 115 acagggttgaaaagatgtggaaagagctgtaggctaaggtggttgaa 161
||||||||||| || |||||||||||||| || ||||| ||||||||
Sbjct: 115 acagggttgaagaggtgtggaaagagctgcagactaagatggttgaa 161
>28226.m000839 r2r3-myb transcription factor, putative
Length = 843
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 109 aagaagacagggttgaaaagatgtggaaagagctgtaggctaaggtggttgaattactt 167
||||| ||||| || || ||||||||||||||||| ||||| | ||||||||||||||
Sbjct: 124 aagaaaacaggtttaaagagatgtggaaagagctgcaggcttcgctggttgaattactt 182
>30147.m013953 conserved hypothetical protein
Length = 258
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 203 aagaagaagaccttatcattagacttcataatct 236
|||||||||||||||||||| | |||||||||||
Sbjct: 134 aagaagaagaccttatcattcgtcttcataatct 167
>28154.m000040 r2r3-myb transcription factor, putative
Length = 906
Score = 52.0 bits (26), Expect = 4e-06
Identities = 86/106 (81%)
Strand = Plus / Plus
Query: 127 agatgtggaaagagctgtaggctaaggtggttgaattacttaagccctaatgtgaaaaga 186
|||||||| ||||| || || || || ||| | |||||||| || ||| || | ||||||
Sbjct: 142 agatgtggcaagagttgcagactcagatggataaattacttgaggcctgatcttaaaaga 201
Query: 187 gggaattttactgaagaagaagaagaccttatcattagacttcata 232
|| || ||||||||||||||||| || ||||| |||| |||||||
Sbjct: 202 ggcaactttactgaagaagaagatgagcttattattaagcttcata 247