Jatropha Genome Database

JcCB0421511.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0421511.10 + phase: 1 /pseudo/partial
         (488 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014487 conserved hypothetical protein                          373   e-103

>30147.m014487 conserved hypothetical protein
          Length = 1638

 Score =  373 bits (188), Expect = e-103
 Identities = 354/408 (86%), Gaps = 1/408 (0%)
 Strand = Plus / Plus

                                                                        
Query: 74   ccaaatacgtttagttttaaaattgaagacaagaagggccggatgcacagtatttacttg 133
            |||||| | ||| |||| ||||||||||||||||||||  | |||||||| |||||||| 
Sbjct: 1222 ccaaattcatttggtttcaaaattgaagacaagaaggggagaatgcacag-atttacttc 1280

                                                                        
Query: 134  tgatactcggagtttaacagatttaataacttcaatacttcagagactaggggatgacat 193
            ||||||||| ||| | |||||| |||||||| |||| ||||||||  ||||  |||| ||
Sbjct: 1281 tgatactcgaagtctgacagatctaataactgcaatccttcagaggttaggaaatgatat 1340

                                                                        
Query: 194  tgaccgtaacaacttgcctcaaattttgtatgaagatgaagatcatgacaaagttgttct 253
            ||| ||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||
Sbjct: 1341 tgatcgtaacaacttgcctcaaattctgtatgaagatgatgaccatgataaagttgttct 1400

                                                                        
Query: 254  ggagtcagatagtgatcttgtaacagctgtcgatcatgcaaaatcagctggtttgaaggg 313
            |||||| ||||||||||||||||| || ||||| |||||||||| ||||||||| |||||
Sbjct: 1401 ggagtcggatagtgatcttgtaactgcagtcgaacatgcaaaattagctggtttcaaggg 1460

                                                                        
Query: 314  tctgaggttgcatttagattattctggcgtacatggtcgccgaggtggttctagttcagg 373
             ||||||||||||||||| |||||||| || | | ||||  | || |||||| |||||||
Sbjct: 1461 cctgaggttgcatttagactattctggagtccgtagtcggagggggggttctggttcagg 1520

                                                                        
Query: 374  agatttagattacacacacacagatgcatgggctgctgcatacagtgctgtagcagcagg 433
            |||||||| |||  | || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 1521 agatttagcttatgctcagaaagatgcatgggctgctgcatacagtgctgtagcagcagg 1580

                                                            
Query: 434  tgctgctctggttgctgggttaggcgtgcttgcatatttgcgaagatc 481
            ||||||||||||||||||  |||| || || ||||| |||||||||||
Sbjct: 1581 tgctgctctggttgctggcctaggtgtactagcatacttgcgaagatc 1628