Jatropha Genome Database

JcCB0416831.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0416831.10 - phase: 0 /pseudo
         (290 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29588.m000889 Cycloartenol synthase, putative                          90   8e-18
27446.m000472 Cycloartenol synthase, putative                          82   2e-15
27446.m000471 Cycloartenol synthase, putative                          78   3e-14
30169.m006605 Cycloartenol synthase, putative                          54   5e-07

>29588.m000889 Cycloartenol synthase, putative
          Length = 2226

 Score = 89.7 bits (45), Expect = 8e-18
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagggaggcaatgacccttacatttacagcacaaacaactttcttggaaggcaaatatgg 81
           |||||||| ||| ||||||| ||||| ||||||||||| ||||  ||||||||||| |||
Sbjct: 22  gagggaggaaataacccttatatttatagcacaaacaattttcagggaaggcaaatttgg 81

                                                                       
Query: 82  gagtttgattctgatgctggcagtcctgaagagcgagaagaggtcgaaaagtctcgacaa 141
           |  |||||| || ||||||| | ||||||||| | ||  ||||| ||| |  |||| |||
Sbjct: 82  gtatttgatcctaatgctggtactcctgaagaacaagccgaggttgaagaagctcgtcaa 141

                                                                
Query: 142 aattactggaacaatcgttttcagatcaaaccaagctctgatcttctttggca 194
           || | |||||| ||||| |||||| |||| || | ||||||||| ||||||||
Sbjct: 142 aacttctggaaaaatcgatttcaggtcaagcctaactctgatctcctttggca 194


>27446.m000472 Cycloartenol synthase, putative
          Length = 2274

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggaggcttagggttgcagagggaggcaatgacccttacatttacagcacaaacaac 60
           ||||||||||| | | | ||||| ||||| ||||||||  | |||||||| ||||| |||
Sbjct: 1   atgtggaggctgaagatagcagaaggagggaatgacccacatatttacagtacaaataac 60

                                                    
Query: 61  tttcttggaaggcaaatatgggagtttgattctgatgctgg 101
           ||||| ||||| |||||||||||||||||| |||| |||||
Sbjct: 61  tttctgggaagacaaatatgggagtttgatcctgacgctgg 101


>27446.m000471 Cycloartenol synthase, putative
          Length = 1234

 Score = 77.8 bits (39), Expect = 3e-14
 Identities = 80/91 (87%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                       
Query: 26  gaggcaatgacccttacatttacagcacaaacaactttctt-ggaaggcaaatatgggag 84
           |||| ||||| ||||||||||| || |||||||| |||||| ||||||||||||||||||
Sbjct: 26  gagggaatgatccttacatttatagtacaaacaa-tttcttaggaaggcaaatatgggag 84

                                          
Query: 85  tttgattctgatgctggcagtcctgaagagc 115
           |||||| || |||| ||||  ||||||||||
Sbjct: 85  tttgatcctaatgcaggcacacctgaagagc 115


>30169.m006605 Cycloartenol synthase, putative
          Length = 2235

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 46  tacagcacaaacaactttcttggaaggcaaatatgggagtttgattctgatgctggcagt 105
           ||||||||||||||||   | || ||||||||||||||||| ||| ||||||| |||| |
Sbjct: 49  tacagcacaaacaactacgtagggaggcaaatatgggagttcgatcctgatgcaggcact 108

                      
Query: 106 cctgaagagcg 116
           || || |||||
Sbjct: 109 cccgaggagcg 119