Jatropha Genome Database
- JcCB0411911.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0411911.10 + phase: 0 /partial
(507 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28196.m000208 pentatricopeptide repeat-containing protein, putative 252 2e-66
48562.m000006 pentatricopeptide repeat-containing protein, putative 216 1e-55
>28196.m000208 pentatricopeptide repeat-containing protein, putative
Length = 1215
Score = 252 bits (127), Expect = 2e-66
Identities = 286/339 (84%)
Strand = Plus / Plus
Query: 147 gaacaacctcattaacttgtatgcgaaatccgggtatattgttgatgcccgcaatgtatt 206
||||| ||| |||||||||||||| ||||| ||||||||||| |||||||| | ||||||
Sbjct: 3 gaacagccttattaacttgtatgccaaatctgggtatattgtcgatgcccgtagtgtatt 62
Query: 207 tgatgaaatgcctgtaaagagcacattctcatggaatacgattctttcggggtatgcaag 266
||| ||||||||||| |||| ||| |||||||||||||||||||| | || |||||||
Sbjct: 63 tgacgaaatgcctgtgaagaccacgttctcatggaatacgattctcactggttatgcaaa 122
Query: 267 acaaggcaaactagataaagcccttcatgtgtttgatgaaatacctgatcgtgattctgt 326
| ||| ||| ||| |||| ||| | |||||||||||||||||||||||||||||| ||
Sbjct: 123 attaggaaaattagctaaaacccattctgtgtttgatgaaatacctgatcgtgattcggt 182
Query: 327 ttcttggactacaatgattgtgggttataatcaaatggcttgttttgaaaatgcaataaa 386
||| ||||||| ||||||| |||||||||| ||||||| | | ||||||| |||||||||
Sbjct: 183 ttcatggactataatgattatgggttataaccaaatgggtcggtttgaaagtgcaataaa 242
Query: 387 gatgtttgtagatatggttaaggataaagtgtcaccatcccagtttactataactaacgt 446
|||||||||| |||||| ||||||||||| | ||| ||||| |||| || ||||| ||
Sbjct: 243 aatgtttgtagctatggtgaaggataaagttttacctacccagcttacgattactaatgt 302
Query: 447 actttcttcatgtgcggctctaagagctctagatattgg 485
| || |||| ||||| ||||| | |||||||| |||||
Sbjct: 303 atttgcttcttgtgctgctcttggggctctagacattgg 341
>48562.m000006 pentatricopeptide repeat-containing protein, putative
Length = 1557
Score = 216 bits (109), Expect = 1e-55
Identities = 241/285 (84%)
Strand = Plus / Plus
Query: 214 atgcctgtaaagagcacattctcatggaatacgattctttcggggtatgcaagacaaggc 273
||||| || |||| ||| |||||||||||||||||||| | || ||||||| || |||
Sbjct: 1 atgccggtgaagaccacgttctcatggaatacgattctcactggttatgcaaaactagga 60
Query: 274 aaactagataaagcccttcatgtgtttgatgaaatacctgatcgtgattctgtttcttgg 333
| | ||| |||||||| | |||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 acattagctaaagcccattctgtgtttgatgaaatacctgatcgtgattctgtttcatgg 120
Query: 334 actacaatgattgtgggttataatcaaatggcttgttttgaaaatgcaataaagatgttt 393
||||||||||||||||||||||| ||||||| | ||||||||| ||||||||| ||||||
Sbjct: 121 actacaatgattgtgggttataaccaaatgggtcgttttgaaagtgcaataaaaatgttt 180
Query: 394 gtagatatggttaaggataaagtgtcaccatcccagtttactataactaacgtactttct 453
|||| |||| | ||||| ||||| | ||| |||||||||| | ||||| ||| || ||
Sbjct: 181 gtagctatgatgaaggacaaagttttacctacccagtttacggttactaatgtatttgct 240
Query: 454 tcatgtgcggctctaagagctctagatattggtagaaagattcat 498
|| ||||| ||||| | |||||||| ||||||| ||||||||||
Sbjct: 241 tcttgtgctgctcttggggctctagacattggtaaaaagattcat 285