Jatropha Genome Database

JcCB0403471.20
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0403471.20 + phase: 0 /partial
         (737 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30226.m001998 zeaxanthin epoxidase, putative                          389   e-107

>30226.m001998 zeaxanthin epoxidase, putative
          Length = 1380

 Score =  389 bits (196), Expect = e-107
 Identities = 433/512 (84%)
 Strand = Plus / Plus

                                                                       
Query: 152 agaggtttaggatgttgattgctggtggggggataggagggttggtcttggctttggcag 211
           ||||| ||||||| |||||||||||||| || ||||| || ||||| |||||||||||||
Sbjct: 83  agaggcttaggattttgattgctggtggtggtatagggggattggttttggctttggcag 142

                                                                       
Query: 212 caaaacacaaaggatttgatgtgaaggtgtttgagaaagatttgagcgcagtgagaggtg 271
           ||||| | | |||||||||||||||| | |||||||||||||||||  |||| ||||| |
Sbjct: 143 caaaaaagagaggatttgatgtgaagatatttgagaaagatttgagttcagtaagagggg 202

                                                                       
Query: 272 agggtaagcacagaggtccgattcaactattaagtagtgctttggcagttctgcaagcta 331
           | || | |||||| ||||| || ||||| || ||||| |||||||| |||||  ||||| 
Sbjct: 203 aaggcatgcacaggggtccaatacaacttttgagtagcgctttggctgttcttaaagctg 262

                                                                       
Query: 332 ttgacaaacaagttgctgagcaaatcatggaagctggttgtgttactggtgatagaatca 391
           ||||  || | |||||  | |||||  | ||| |||||||||| || ||||| |||||||
Sbjct: 263 ttgatgaaaatgttgcaaatcaaatacttgaaactggttgtgtcaccggtgacagaatca 322

                                                                       
Query: 392 atggacttgctgatggcgtctcaggggaatggtttacccagtttgatctttcaactcctg 451
           |||| ||||||||||| || ||||| |||||||||||  | ||||||||||| |||||||
Sbjct: 323 atggccttgctgatggtgtttcaggtgaatggtttacgaaatttgatctttcgactcctg 382

                                                                       
Query: 452 ctttacaaagggcgcttcctgtcactagagtaatctgtaggatggcactgcaagacatat 511
           ||||| |||||| ||| || ||||||||||||||||| || |||||| ||||||||||||
Sbjct: 383 ctttaaaaagggggctgccagtcactagagtaatctgcagaatggcattgcaagacatat 442

                                                                       
Query: 512 tactaaatgctgtaggtttagacattgtaagcaacaaatcgaaagttgttgactttatcg 571
           |||||||||| || ||||| ||||| ||||| |||||||| |||||||| ||||| || |
Sbjct: 443 tactaaatgcagtgggttttgacatagtaagaaacaaatctaaagttgtagacttcatgg 502

                                                                       
Query: 572 aagactctagcaaggtcacagtgatccttgaggatggacgacgatataatggggatgttt 631
           |||||||||||||||||||||| || || ||||||||||    |||| |||| |||||||
Sbjct: 503 aagactctagcaaggtcacagtaattctggaggatggacagaaatatgatggtgatgttt 562

                                           
Query: 632 tagttggggctgatggaatatggtcaaaagta 663
           ||||||| || |||||||||||||| ||||||
Sbjct: 563 tagttggagcagatggaatatggtcgaaagta 594