Jatropha Genome Database

JcCB0402451.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0402451.20 - phase: 0 /partial/short
         (147 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014102 transcription regulator, putative                       172   3e-43

>30147.m014102 transcription regulator, putative
          Length = 276

 Score =  172 bits (87), Expect = 3e-43
 Identities = 132/147 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtttcagcagccaaggtgttgcaggagacatgcaactacatcagaaacttgcacagagaa 60
           |||||||| || ||||||||||||||||| |||||||| ||||||| |||||||||||||
Sbjct: 127 gtttcagctgcgaaggtgttgcaggagacttgcaactatatcagaagcttgcacagagaa 186

                                                                       
Query: 61  gtcgatgatctaagtgagaggctatctgagttattggcaactactgacactgctcaagct 120
           || |||||||| || ||| |||| || ||| |||||||||||||||||||||| ||||||
Sbjct: 187 gttgatgatcttagcgagcggctctcagagctattggcaactactgacactgcccaagct 246

                                      
Query: 121 gccataattaggaatttactaatgcaa 147
           || ||||||||||||||||| ||||||
Sbjct: 247 gctataattaggaatttacttatgcaa 273