Jatropha Genome Database

JcCB0402101.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0402101.10 - phase: 0 /partial
         (543 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30221.m002257 strictosidine synthase, putative                        444   e-124

>30221.m002257 strictosidine synthase, putative
          Length = 1176

 Score =  444 bits (224), Expect = e-124
 Identities = 359/404 (88%)
 Strand = Plus / Plus

                                                                        
Query: 140  gcagattgcgcaagtactggctgaagggcgagaaagcagggacttcagaagtattagcca 199
            |||||||| |||| ||||||||||| |||||||| ||||||||| | |||||||||||||
Sbjct: 770  gcagattgagcaaatactggctgaaaggcgagaaggcagggactactgaagtattagcca 829

                                                                        
Query: 200  tcttaccagggtttcctgacaatgtcagaacaaatgaagagggtaacttttgggtagcag 259
            |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 830  tcttgccaggatttcctgacaatgtcagaacaaatgaagaaggtaacttttgggtagcag 889

                                                                        
Query: 260  ttcactgccgccgatcgttatacacttacatatgtgcattatacccaaaactgagaatgt 319
            | || || |||||  | |  ||  ||||||||||||||||||||||||||||||| |  |
Sbjct: 890  tccattgtcgccgcacatattattcttacatatgtgcattatacccaaaactgaggacat 949

                                                                        
Query: 320  tcatgctcaagcttccaatatcagcaaagattcaatacctgcttcacattgggggccggc 379
            || | |||||||||||||| || ||||||||||| |||||| |||||||||| |||||||
Sbjct: 950  tcttactcaagcttccaatttctgcaaagattcattacctgtttcacattggaggccggc 1009

                                                                        
Query: 380  ttcatgcagtggctgtaaaatacagcccagaaggtaagatcttgcagatattggaagaca 439
            ||||||| ||||||||||||||||| |||||||| ||| |  ||||||||||||| || |
Sbjct: 1010 ttcatgcggtggctgtaaaatacagtccagaaggcaagcttctgcagatattggaggata 1069

                                                                        
Query: 440  gtcaggggaaggttgttaaagcaatcagcgaagtggaagagaaggatgggaaactgtgga 499
            |||||||||||||||| ||||||||||| ||||||||||||| ||||||||| || ||||
Sbjct: 1070 gtcaggggaaggttgtcaaagcaatcagtgaagtggaagagagggatgggaagctatgga 1129

                                                        
Query: 500  tggggagtgttctcatgccttttattggagtttacaacttggct 543
            ||||||||||||| ||||||||| |||||||||||||| |||||
Sbjct: 1130 tggggagtgttctgatgccttttgttggagtttacaacctggct 1173