Jatropha Genome Database
- JcCB0402071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0402071.10 - phase: 0 /partial
(965 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27914.m000425 glutamate decarboxylase, putative 904 0.0
27914.m000427 glutamate decarboxylase, putative 771 0.0
29780.m001375 glutamate decarboxylase, putative 484 e-136
29662.m000447 glutamate decarboxylase, putative 228 5e-59
>27914.m000425 glutamate decarboxylase, putative
Length = 1398
Score = 904 bits (456), Expect = 0.0
Identities = 753/852 (88%)
Strand = Plus / Plus
Query: 112 cctaaagaagcagcttatcaaatcatcaatgatgagctaatgttggatgggaatcctaga 171
|||||||| |||||||| |||||||| ||||| ||||||||||||||||| ||||| ||
Sbjct: 19 cctaaagaggcagcttaccaaatcattaatgacgagctaatgttggatggaaatccaagg 78
Query: 172 cttaacctcgcttcctttgtgactacatggatggaacctgaatgtgataagcttattatg 231
|||||||| || |||||||| |||||||||||||| ||||| || ||||||||||| |||
Sbjct: 79 cttaacctggcatcctttgttactacatggatggagcctgagtgcgataagcttatcatg 138
Query: 232 gcttctgtcaacaagaactacgttgacatggatgagtatcctgtcaccactgagttacag 291
|||| ||||| |||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 139 tcttccgtcaataagaactatgttgacatggatgagtatcctgtcaccactgaattgcag 198
Query: 292 aatcgatgtgtgaacatgatagcacatctttttaatgcaccacttggagaagcagaggct 351
||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 199 aatcgatgtgtcaacatgatagcacatctttttaacgcaccacttggagactcagagact 258
Query: 352 gcagttggagttggaacagttggatcttcagaggcaataatgttggctggtttagcattt 411
||||||||||| || || |||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 259 gcagttggagtagggactgttggatcttcagaggcaataatgcttgctggattagcattt 318
Query: 412 aagagaaagtggcaaaacaggagaaaagctcaaggaaaacccattgataaccctaatatt 471
|||||||||||||| |||||||||||||| | ||||| || ||||| || || |||
Sbjct: 319 aagagaaagtggcagaacaggagaaaagccgagggaaagccttatgatagtcccaacatt 378
Query: 472 gtcactggtgccaatgttcaggtttgctgggagaaatttgcaaggtactttgaggtggaa 531
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 379 gtaaccggtgccaatgttcaggtctgctgggagaaatttgcaaggtactttgaggtggag 438
Query: 532 ttgaaagaagtaaagctaaagccggattattatgtactagaccctgaaaaggcagtggag 591
||||||| || ||||||| | | | ||||||||| | ||||||||||||||||||||
Sbjct: 439 ctgaaagaggtgaagctaagggagaactattatgtaatggaccctgaaaaggcagtggaa 498
Query: 592 atggtggatgagaacacaatctgtgtagctgctattcttggctccaccctcaatggagaa 651
||||| ||||| ||||||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 499 atggttgatgaaaacacaatctgcgtagctgctattcttggctctactttaaatggagaa 558
Query: 652 tttgaagatgtaaagcaattgaatgatcttttgatggagaagaataaggaaacaggatgg 711
||||||||||| |||| ||||||||||||||| | |||||||| ||| |||| ||||||
Sbjct: 559 tttgaagatgtcaagctcttgaatgatcttttggttgagaagaacaagaaaactggatgg 618
Query: 712 gaaaccccgattcatgtggatgcagcaagtggtgggtttattgcaccatttttgtatcca 771
| || || |||||||||||||||||||||||||||||||||||||| ||| | || |||
Sbjct: 619 aatactccaattcatgtggatgcagcaagtggtgggtttattgcaccttttctttaccca 678
Query: 772 gaacttgaatgggattttagattaccattagttaagagtattaatgttagtggtcacaaa 831
|| ||||| |||||||||||||| |||||||| ||||| |||||||||||||| || |||
Sbjct: 679 gagcttgagtgggattttagattgccattagtgaagagcattaatgttagtggccataaa 738
Query: 832 tatgggcttgtatatgctggtattggttgggtcatttggagaagcaaagaggacttgcct 891
||||| ||||| |||||||| ||||||||| |||||||||| |||||||| |||||||||
Sbjct: 739 tatggacttgtttatgctgggattggttggatcatttggaggagcaaagaagacttgcct 798
Query: 892 gaagagctcattttccatattaattaccttggagctgatcaacccaccttcaccctcaat 951
||||||||||| |||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct: 799 gaagagctcatcttccatattaattatcttggagctgatcagcctactttcaccctcaat 858
Query: 952 ttctccaaaggt 963
||||||||||||
Sbjct: 859 ttctccaaaggt 870
>27914.m000427 glutamate decarboxylase, putative
Length = 1497
Score = 771 bits (389), Expect = 0.0
Identities = 775/901 (86%), Gaps = 2/901 (0%)
Strand = Plus / Plus
Query: 64 tatgttcgagcgtcacttcccaggttcaagatgccagtgaactcaatccctaaagaagca 123
||||||||||| |||||||| |||| |||||||| | || ||| ||||| |||||||||
Sbjct: 64 tatgttcgagcttcacttcctcggtttaagatgccggagagctcgatcccaaaagaagca 123
Query: 124 gcttatcaaatcatcaatgatgagctaatgttggatgggaatcctagacttaacctcgct 183
||||| || || || || |||||||||||||| || || ||||| ||| | || | ||
Sbjct: 124 gcttaccagataataaacgatgagctaatgttagacggaaatccaagattgaatttggcg 183
Query: 184 tcctttgtgactacatggatggaacctgaatgtgataagcttattatggcttctgtcaac 243
|| ||||||||||| |||||||||||||| |||||||||||||| ||||||||| |||||
Sbjct: 184 tcatttgtgactacttggatggaacctgagtgtgataagcttataatggcttctatcaac 243
Query: 244 aagaactacgttgacatggatgagtatcctgtcaccactgagttacagaatcgatgtgtg 303
|| ||||| || |||||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 244 aaaaactatgtcgacatggatgagtaccctgtcactactgaattgcagaaccgatgtgtt 303
Query: 304 aacatgatagcacatctttttaatgcaccacttggagaagcagaggctgcagttggagtt 363
|| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 304 aatatgatagcacatctctttaacgcaccacttggagattcagagactgcagttggagta 363
Query: 364 ggaacagttggatcttcagaggcaataatgttggctggtttagcatttaagagaaagtgg 423
|||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 364 ggaacagtaggatcttcagaggctataatgttggctggattagcattcaagagaaagtgg 423
Query: 424 caaaacaggagaaaagctcaaggaaaacccattgataaccctaatattgtcactggtgcc 483
|| |||| |||||||||| | ||||| ||| |||||| ||||| |||||||||||||||
Sbjct: 424 cagaacaagagaaaagctgagggaaagccctatgataagcctaacattgtcactggtgcc 483
Query: 484 aatgttcaggtttgctgggagaaatttgcaaggtactttgaggtggaattgaaagaagt- 542
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 484 aatgttcaggtttgttgggagaaatttgcaaggtattttgaagtggagttgaaggaagtg 543
Query: 543 aaagctaaagccggattattatgtactagaccctgaaaaggcagtggagatggtggatga 602
||| || || || || ||||| | || |||| || ||||| || ||||| |||||
Sbjct: 544 aaacttagagatgg-gtactatgtgatggatcctgtgaaagcagttgaaatggttgatga 602
Query: 603 gaacacaatctgtgtagctgctattcttggctccaccctcaatggagaatttgaagatgt 662
|||||||||||| || |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 603 gaacacaatctgcgtcgctgctattcttggttccacccttaatggagaatttgaagatgt 662
Query: 663 aaagcaattgaatgatcttttgatggagaagaataaggaaacaggatgggaaaccccgat 722
||||| ||||||||||| |||| ||||| || ||| |||| |||||||| || || ||
Sbjct: 663 aaagctcttgaatgatctcttgacagagaaaaacaagcaaactggatgggatactccaat 722
Query: 723 tcatgtggatgcagcaagtggtgggtttattgcaccatttttgtatccagaacttgaatg 782
||||| ||||||||||||||||| ||||||||||| ||| | || ||||||||||| ||
Sbjct: 723 acatgttgatgcagcaagtggtggatttattgcaccttttctttacccagaacttgagtg 782
Query: 783 ggattttagattaccattagttaagagtattaatgttagtggtcacaaatatgggcttgt 842
|||||| ||||| ||||| || |||||||| ||||||||||| ||||||||||| || ||
Sbjct: 783 ggatttcagattgccattggtgaagagtatcaatgttagtgggcacaaatatggactagt 842
Query: 843 atatgctggtattggttgggtcatttggagaagcaaagaggacttgcctgaagagctcat 902
|||||||| |||||||||||||||||||| | |||||| ||||||||||| || |||||
Sbjct: 843 ctatgctggaattggttgggtcatttggaggaacaaagatgacttgcctgatgaactcat 902
Query: 903 tttccatattaattaccttggagctgatcaacccaccttcaccctcaatttctccaaagg 962
|||||||| || || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 903 cttccatatcaactatcttggagctgatcaacctaccttcaccctcaatttctccaaagg 962
Query: 963 t 963
|
Sbjct: 963 t 963
>29780.m001375 glutamate decarboxylase, putative
Length = 894
Score = 484 bits (244), Expect = e-136
Identities = 710/864 (82%), Gaps = 1/864 (0%)
Strand = Plus / Plus
Query: 31 gatgtttctgttcattcaacatttgcctctcgttatgttcgagcgtcacttcccaggttc 90
||||| || ||||| || || ||||||||||| |||||||||| ||||||||| |||| |
Sbjct: 31 gatgtatcggttcactccacctttgcctctcgctatgttcgagagtcacttccaaggtac 90
Query: 91 aagatgccagtgaactcaatccctaaagaagcagcttatcaaatcatcaatgatgagcta 150
|||||||| | |||||| || || || || ||||| | || || || || ||||||||
Sbjct: 91 aagatgccggagaactcgataccgaaggaggcagcattccagattataaacgatgagctg 150
Query: 151 atgttggatgggaatcctagacttaacctcgcttcctttgtgactacatggatggaacct 210
||| | |||||||| || || | ||| | || || || ||||| || |||||||| |||
Sbjct: 151 atgcttgatgggaaaccgaggttgaacttggcatcattcgtgacaacttggatggagcct 210
Query: 211 gaatgtgataagcttattatggcttctgtcaacaagaactacgttgacatggatgagtat 270
|||||||||||||||||||||| | | ||||| ||||| |||||||||||||||||
Sbjct: 211 gaatgtgataagcttattatggacgccatgaacaaaaactatgttgacatggatgagtac 270
Query: 271 cctgtcaccactgagttacagaatcgatgtgtgaacatgatagcacatctttttaatgca 330
|| |||||||||||| | ||||| || || |||||||||||||||||||| || |||||
Sbjct: 271 cccgtcaccactgagcttcagaaccggtgcgtgaacatgatagcacatctgttcaatgct 330
Query: 331 ccacttggagaagcagaggctgcagttggagttggaacagttggatcttcagaggcaata 390
||||| ||||| | |||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 331 ccactgggagactctgaggctgctgtcggggtaggaaccgtaggatcatcagaggccata 390
Query: 391 atgttggctggtttagcatttaagagaaagtggcaaaacaggagaaaagctcaaggaaaa 450
|||||||||||| | || || ||||||||||||||||||| | | || ||| ||||||||
Sbjct: 391 atgttggctggtcttgccttcaagagaaagtggcaaaacaagcgtaaggctgaaggaaaa 450
Query: 451 cccattgataaccctaatattgtcactggtgccaatgttcaggtttgctgggagaaattt 510
|| ||| || || || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 451 ccttatgacaagcccaacattgtaactggtgccaatgttcaggtgtgctgggagaaattt 510
Query: 511 gcaaggtactttgaggtggaattgaaagaagtaaagctaaagccggattattatgtacta 570
||||||||||||||||| ||| |||| ||||| ||||||||| | || |||||| |
Sbjct: 511 gcaaggtactttgaggtagaactgaaggaagtgaagctaaaggaagggtactatgtaatg 570
Query: 571 gaccctgaaaaggcagtggagatggtggatgagaacacaatctgtgtagctgctattctt 630
||||| | | | || | || ||||||||||| ||||| || || |||||||| ||| |
Sbjct: 571 gacccagtacaagctgctgaaatggtggatgaaaacactatttgcgtagctgccattttg 630
Query: 631 ggctccaccctcaatggagaatttgaagatgtaaagcaattgaatgatcttttgatggag 690
|| || ||||| |||||||||||||||||||| |||| ||||||||| | ||| | |||
Sbjct: 631 ggttctacccttaatggagaatttgaagatgtcaagcttttgaatgatttgttggtcgag 690
Query: 691 aagaataaggaaacaggatgggaaaccccgattcatgtggatgcagcaagtggtgggttt 750
|||||||| | || || ||||| || || |||||||| |||||||| |||||||| |||
Sbjct: 691 aagaataaagtcaccgggtgggatactccaattcatgttgatgcagctagtggtggattt 750
Query: 751 attgcaccatttttgtatccagaacttgaatgggattttagattaccattagttaagagt 810
||||||||||| |||| ||||| ||||||||||| || || | ||||| || || |||
Sbjct: 751 attgcaccattcttgtggccagagcttgaatgggacttcaggcttccattggtcaaaagt 810
Query: 811 attaatgttagtggtcacaaatatgggcttgtatatgctggtattggtt-gggtcatttg 869
|||||||||||||| ||||||||||| ||||| ||||| |||||||||| |||| |||||
Sbjct: 811 attaatgttagtggccacaaatatggccttgtctatgccggtattggttggggttatttg 870
Query: 870 gagaagcaaagaggacttgcctga 893
||| ||||||||||||||||||||
Sbjct: 871 gaggagcaaagaggacttgcctga 894
>29662.m000447 glutamate decarboxylase, putative
Length = 1590
Score = 228 bits (115), Expect = 5e-59
Identities = 691/883 (78%)
Strand = Plus / Plus
Query: 80 ttcccaggttcaagatgccagtgaactcaatccctaaagaagcagcttatcaaatcatca 139
|||||||||| || ||||||| ||| ||||| || || |||||||| |||||| | || |
Sbjct: 197 ttcccaggtttaaaatgccagagaagtcaatgccgaaggaagcagcatatcaagtgatta 256
Query: 140 atgatgagctaatgttggatgggaatcctagacttaacctcgcttcctttgtgactacat 199
|||||||||||||| ||||||||||||| || || ||| | ||||||||||| || ||||
Sbjct: 257 atgatgagctaatgctggatgggaatcccaggctgaacttggcttcctttgttacaacat 316
Query: 200 ggatggaacctgaatgtgataagcttattatggcttctgtcaacaagaactacgttgaca 259
||||||| ||||| ||| | || || || |||||||| | |||||||| || |||||||
Sbjct: 317 ggatggagcctgagtgtaacaatctcatcatggcttccattaacaagaattatgttgaca 376
Query: 260 tggatgagtatcctgtcaccactgagttacagaatcgatgtgtgaacatgatagcacatc 319
|||||||||| ||||||||||||||| | ||| |||| ||||| || |||||||| ||
Sbjct: 377 tggatgagtaccctgtcaccactgagctccaggatcgctgtgttaatatgatagctcaca 436
Query: 320 tttttaatgcaccacttggagaagcagaggctgcagttggagttggaacagttggatctt 379
| || ||||||| ||||||| | || ||||||| || || ||||| || ||||| |
Sbjct: 437 tgttccatgcacctgttggagatgatgaaactgcagtcggggtcggaactgtgggatcgt 496
Query: 380 cagaggcaataatgttggctggtttagcatttaagagaaagtggcaaaacaggagaaaag 439
|||| || |||||| ||||||| ||||| ||||| || |||||||| ||| | ||| ||
Sbjct: 497 cagaagctataatgctggctggattagcttttaaaaggaagtggcagcacaagcgaatag 556
Query: 440 ctcaaggaaaacccattgataaccctaatattgtcactggtgccaatgttcaggtttgct 499
| | || ||||| |||||| || || || || || || || ||||| ||||| || |
Sbjct: 557 cagagggcaaaccttctgataagcccaacatagtgacaggagctaatgtgcaggtctgtt 616
Query: 500 gggagaaatttgcaaggtactttgaggtggaattgaaagaagtaaagctaaagccggatt 559
||||||| |||||||| |||||||| || ||| |||| || || ||| |||| || |
Sbjct: 617 gggagaagtttgcaagatactttgaagttgaactgaaggaggtgaagttaaaagagggct 676
Query: 560 attatgtactagaccctgaaaaggcagtggagatggtggatgagaacacaatctgtgtag 619
||||||| | ||||||| || ||||| || ||||||||||||||||||||||| | |
Sbjct: 677 attatgtgatggaccctgtgaaagcagttgaaatggtggatgagaacacaatctgcattg 736
Query: 620 ctgctattcttggctccaccctcaatggagaatttgaagatgtaaagcaattgaatgatc 679
| || ||| | || || ||||| | |||||| ||||||||||| |||| | ||| |
Sbjct: 737 cagccattttaggatcaaccctgactggagagtttgaagatgtgaagcttctttctgaac 796
Query: 680 ttttgatggagaagaataaggaaacaggatgggaaaccccgattcatgtggatgcagcaa 739
| | | | | |||| |||| || || ||| | ||||| |||||||| ||||| || |
Sbjct: 797 tcctcaccaaaaggaatgaggagactggttggaacaccccaattcatgttgatgctgcca 856
Query: 740 gtggtgggtttattgcaccatttttgtatccagaacttgaatgggattttagattaccat 799
| || ||||||||||| || || | || ||||| ||||| |||||||| | || || |
Sbjct: 857 gcggagggtttattgctcctttcgtttacccagatcttgagtgggatttccgtttgcctt 916
Query: 800 tagttaagagtattaatgttagtggtcacaaatatgggcttgtatatgctggtattggtt 859
| || ||||| |||||||||||||||||||| ||||| ||||| ||||| ||| ||||||
Sbjct: 917 tggtgaagagcattaatgttagtggtcacaagtatggtcttgtttatgccggtgttggtt 976
Query: 860 gggtcatttggagaagcaaagaggacttgcctgaagagctcattttccatattaattacc 919
|||| | ||||| | || || ||||| || || ||||| || || || ||||| ||||
Sbjct: 977 gggttgtgtggaggactaaggaagacttaccagaggagcttatctttcacattaactacc 1036
Query: 920 ttggagctgatcaacccaccttcaccctcaatttctccaaagg 962
||||| |||||||||| || ||||| ||||| ||||| |||||
Sbjct: 1037 ttggatctgatcaaccaactttcactctcaacttctcaaaagg 1079