Jatropha Genome Database

JcCB0401531.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0401531.10 - phase: 0 /pseudo/partial
         (562 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006459 cinnamoyl-CoA reductase, putative                       313   6e-85
29864.m001453 cinnamoyl-CoA reductase, putative                        76   3e-13
29864.m001464 cinnamoyl-CoA reductase, putative                        62   4e-09
29864.m001454 cinnamoyl-CoA reductase, putative                        54   9e-07

>30169.m006459 cinnamoyl-CoA reductase, putative
          Length = 1209

 Score =  313 bits (158), Expect = 6e-85
 Identities = 370/440 (84%), Gaps = 3/440 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgactggagcttccggttacattgcctcatggctcgtgaagttcctcctcctccgtggc 60
           ||||| ||||| |||||||||||||| || ||| | |||||||| || || |  ||||||
Sbjct: 265 gtgaccggagcatccggttacattgcttcttggattgtgaagtttcttctacagcgtggc 324

                                                                       
Query: 61  tacaccgtcaaagcctctgttcgtaatccagatgatcccaagaaggtggaacacttgact 120
           ||||||||||| |||||||||||| | ||| ||||||| |  |||   |||||||||   
Sbjct: 325 tacaccgtcaaggcctctgttcgtgacccaaatgatccaagaaagacagaacacttgcga 384

                                                                       
Query: 121 gcacttgaaggagctcaagagagacttcagctgtttaaagcaaacctattggaagaaggt 180
            ||||||| |||||| | |||||||||||  |||| |||||  | |||||||||||||||
Sbjct: 385 tcacttgatggagctgaggagagacttcaattgttcaaagcggatctattggaagaaggt 444

                                                                       
Query: 181 tcctttgatgctgcaattgaagggtgtgaaggtgttttccatactgcatctccctttttc 240
           || || ||||||||  |||||||||||  ||||||||| |||||||||||||| || |  
Sbjct: 445 tcgttcgatgctgctgttgaagggtgtcgaggtgtttttcatactgcatctcctttctat 504

                                                                       
Query: 241 catgacgttacagatccacagacagaattaattgatcctgcagtgaagggaacactaaat 300
           |||||  |||| ||||| |||   |||||||||||||| ||||||||||||||||| |||
Sbjct: 505 catgatattaccgatcctcag---gaattaattgatccagcagtgaagggaacacttaat 561

                                                                       
Query: 301 gttcttaattcttgtgcaagaactccttcagtcaaacgagttgtcttgacatcttctatc 360
           |||||||| || ||||||| |||||| || ||||| |||||||| |||||||||||||| 
Sbjct: 562 gttcttaactcatgtgcaaaaactccatctgtcaagcgagttgttttgacatcttctatt 621

                                                                       
Query: 361 gctgcagttaattataatggaaagcctcgaactccagaggtagttgtggatgaaacttgg 420
           |||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 622 gctgcagttgcttacaatggaaaacctcgaactccagaggttgtagtggatgaaacttgg 681

                               
Query: 421 ttttctgatccagaattttg 440
           || ||||||||||| |||||
Sbjct: 682 ttctctgatccagacttttg 701


>29864.m001453 cinnamoyl-CoA reductase, putative
          Length = 750

 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 202/254 (79%), Gaps = 2/254 (0%)
 Strand = Plus / Plus

                                                                       
Query: 55  cgtggctacaccgtcaaagcctctgttcgtaatccagatgatcccaagaaggtggaacac 114
           ||||||||||| || |||||  |||||||| | ||| ||||||| |||||    | ||||
Sbjct: 82  cgtggctacactgttaaagctactgttcgtgacccaaatgatccaaagaaaactgcacac 141

                                                                       
Query: 115 ttgactgcacttgaaggagctcaagagagacttcagctgtttaaagcaaacctattggaa 174
           |||  || ||||||||||||  | || ||||||||  ||||||||||  |  || | |||
Sbjct: 142 ttgcttgtacttgaaggagccaaggaaagacttcatttgtttaaagctgatttacttgaa 201

                                                                       
Query: 175 gaaggttcctttgatgctgcaattgaagggtgtgaaggtgttttccatactgcatctccc 234
           ||||| || |||||||||||| |||| || |||| |||||||||||||||||| |  || 
Sbjct: 202 gaaggatcttttgatgctgcagttgatggttgtgtaggtgttttccatactgc-ttgcca 260

                                                                       
Query: 235 tttttc-catgacgttacagatccacagacagaattaattgatcctgcagtgaagggaac 293
           | | ||  ||   | ||| ||||| |||||||||||||||||||||||  ||||||||||
Sbjct: 261 tgtatcttatacagctactgatccgcagacagaattaattgatcctgcgctgaagggaac 320

                         
Query: 294 actaaatgttctta 307
           ||| || |||||||
Sbjct: 321 acttaacgttctta 334


>29864.m001464 cinnamoyl-CoA reductase, putative
          Length = 975

 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 253 gatccacagacagaattaattgatcctgcagtgaagggaacactaaatgttcttaattct 312
           ||||||||||||||| |||||||||||||| | || ||||| || ||||| ||||| || 
Sbjct: 280 gatccacagacagaactaattgatcctgcaattaaaggaacgcttaatgtacttaaatca 339

                  
Query: 313 tgtgcaa 319
           |||||||
Sbjct: 340 tgtgcaa 346


>29864.m001454 cinnamoyl-CoA reductase, putative
          Length = 975

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 167 tattggaagaaggttcctttgatgctgcaattgaagggtgtgaaggtgttttccatactg 226
           ||||||||||||| || |||||  ||| | |||| || ||||| |||||||||||||| |
Sbjct: 194 tattggaagaagggtcttttgactctgtagttgatggatgtgatggtgttttccatacag 253

                  
Query: 227 catctcc 233
           |||||||
Sbjct: 254 catctcc 260