Jatropha Genome Database

JcCB0399861.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0399861.10 - phase: 1 /partial
         (341 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008714 conserved hypothetical protein                          258   2e-68

>30128.m008714 conserved hypothetical protein
          Length = 1326

 Score =  258 bits (130), Expect = 2e-68
 Identities = 208/234 (88%)
 Strand = Plus / Plus

                                                                       
Query: 108 tcttcttctggaatccaactttacggtcagattgagagattacttacggagactgtgagg 167
           ||||||||||||||  ||||||| ||||||||||| |||||||| || || ||||| |||
Sbjct: 202 tcttcttctggaattaaactttatggtcagattgaaagattactcacagaaactgtaagg 261

                                                                       
Query: 168 caatcccaagatgcgtggggtggttcaaaagactggattgaggtcgagggagcatgggtt 227
           || |||||||| || |||||||||| ||||||||||| |||  |||||||||||||||||
Sbjct: 262 cagtcccaagacgcttggggtggtttaaaagactggactgaaatcgagggagcatgggtt 321

                                                                       
Query: 228 ctcaaaccaagaatctcaagacccaagtcagttgttcatttcgttggtggtatatttgtt 287
           ||||||||||||| |||   ||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 322 ctcaaaccaagaagctcgccacccaagtctgttgttcattttgttggtggtatttttgtt 381

                                                                 
Query: 288 ggtgcagctcctcaacttacctaccgtttgtttcttgagcgccttgtagaaaag 341
           || |||||||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 382 ggagcagctccccaacttacctatcgtttgtttcttgagcgccttgcagaaaag 435