Jatropha Genome Database
- JcCB0399791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0399791.10 + phase: 1 /partial
(1484 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30180.m001064 Auxin efflux carrier component, putative 1540 0.0
29651.m000296 hypothetical protein 98 2e-19
29816.m000677 Auxin efflux carrier component, putative 88 2e-16
29662.m000472 Auxin efflux carrier component, putative 88 2e-16
27985.m000882 Auxin efflux carrier component, putative 82 1e-14
29822.m003474 conserved hypothetical protein 72 1e-11
>30180.m001064 Auxin efflux carrier component, putative
Length = 1842
Score = 1540 bits (777), Expect = 0.0
Identities = 1267/1429 (88%), Gaps = 6/1429 (0%)
Strand = Plus / Plus
Query: 1 gctcccttgaatggtcaataactctcttttctctttccacgcttccaaacactcttgtta 60
|||| ||||||||||| || || ||||||||||||||||| ||||| || ||||||||||
Sbjct: 287 gctctcttgaatggtccatcacgctcttttctctttccactcttcctaatactcttgtta 346
Query: 61 tgggcatccctttgttaaagggcatgtatggagatttttcgggaagtcttatggttcaaa 120
|||||||||||||||| ||||| |||||||| ||| || || ||||||||||| ||||
Sbjct: 347 tgggcatccctttgttgaagggtatgtatggggatgactcagggagtcttatggtccaaa 406
Query: 121 tagttgtcctccagtgcataatatggtatactttgatgctctttctatttgaatatagag 180
|||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 407 tagttgtccttcaatgcataatatggtatactttgatgctctttctgtttgaatatagag 466
Query: 181 gagctagaatcctgattggtgaacagtttcctgatactgctggttctataatatctttta 240
|||||||| || ||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 467 gagctagactcttgattggtgaacagtttcctgatactgctggctctataatatccttta 526
Query: 241 gagttgattctgatattatttctttagacggaagagagccattgcaaactgaagcagaac 300
|||||||||||||||| || |||||||| || ||||| ||||||||||||||||| ||
Sbjct: 527 gagttgattctgatatcatatctttagatggtagagaaccattgcaaactgaagctgagg 586
Query: 301 ttggtgaagatgggaagcttcacgttacagttaggaaatcaactagctcaagatcagaaa 360
||||||||||||| || ||||| |||||||| || ||||||||||| || ||||||||||
Sbjct: 587 ttggtgaagatggaaaacttcatgttacagtaagaaaatcaactagttctagatcagaaa 646
Query: 361 ttttctctcgtagatcccatggtccaaattctggcctttcattaactcctagaccatcta 420
| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 647 tcttctctcgtagatcacacggtccaaattctggtctttcattgactcccagaccatcta 706
Query: 421 atctaactaatgcagagatatactctcttcaatcttcaagaaatccaaccccaagaggct 480
||||||| |||| |||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 707 atctaaccaatgtagagatttattctcttcaatcttcaagaaatccaactccaagaggct 766
Query: 481 caagttttaaccatactgatttttattcaatggttaatggcaagaatgcaagtaacgtga 540
||||||||||||||||||||||||| |||||||||||||| || ||||||||||| || |
Sbjct: 767 caagttttaaccatactgatttttactcaatggttaatggaaaaaatgcaagtaatgtta 826
Query: 541 gcccaaggcaatccaacttcggaaacttgccgtttgatgaagaaaatggaggaattggat 600
| || |||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 827 gtcctaggcaatccaactttggtaacttgccatttgatgaagaaaatggaggaattggag 886
Query: 601 tgtttggtaacgtttcaagagcaaatggtggaagtgcttatccagctccacctaatgcag 660
||||||| || || ||||| |||| ||||||||||||||| || ||||||||||| |
Sbjct: 887 tgtttggaaatgtctcaaggacaaa---tggaagtgcttatcctgcaccacctaatgctg 943
Query: 661 ggattttctctcctggggttaaaaagaaagcaaatgggactgataatggaaaggacctgc 720
|||||||||||||||| | ||| ||||| |||||||| |||| ||||| ||||| | |
Sbjct: 944 ggattttctctcctggagctaagaagaaggcaaatggagctgaaaatggcaaggatttac 1003
Query: 721 atatgtttgtttggagttctagtgcttcaccagtatcagaaggtgggattcatgtcttca 780
| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 1004 acatgtttgtatggagttccagtgcttcaccagtatcagaaggtggaattcatgtcttca 1063
Query: 781 gaggaggggattatggcaatgattttggtggggtagcacatcagaa---agataacgacg 837
| || |||||| |||||| ||| ||||||||||||| || ||||| |||| | || |
Sbjct: 1064 ggggtggggatcatggcattgaccttggtggggtagctcaccagaaagtagattatgatg 1123
Query: 838 agtttggtagagatgagttcagttttggaaacagaccggtgacaaatggggtggaccgtg 897
|||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||| | |
Sbjct: 1124 agtttggtcgagatgagttcagctttggaaacagaccagtgccaaatggggtggacaggg 1183
Query: 898 agggtccagtgctttccaagcttggttcaagctccacagcagagctccaccccaagactg 957
|||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 1184 agggcccagtgctttccaagcttggctcaagctccacagcagagctacacccaaagactg 1243
Query: 958 gtgttgatggtgaacccaagcctactgccatgccacctgctagtgttatgacaagactca 1017
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 gtgttgatggtgaaccaagggctactgccatgccacctgctagtgttatgacaagactca 1303
Query: 1018 ttcttattatggtttggagaaaacttataaggaatcccaatacttattccagtctcattg 1077
||||||||||||| |||||||| || ||||| ||||| |||||||||||||| |||||||
Sbjct: 1304 ttcttattatggtgtggagaaagctcataagaaatcctaatacttattccagcctcattg 1363
Query: 1078 gccttacttggtctcttgtttctttcaaatggaatatagtgatgcctgctattattgctc 1137
||||||| ||||||||||| |||||||||| | |||||| |||||||| || ||||||
Sbjct: 1364 gccttacctggtctcttgtctctttcaaattgcatatagaaatgcctgcaatcattgctg 1423
Query: 1138 gttcaatatctatcctatccgatgcaggtcttggaatggctatgtttagtcttggattat 1197
|||| ||| | ||||| ||| | || |||||||||||||| |||||||||||||| || |
Sbjct: 1424 gttctatagccatcctgtccaacgctggtcttggaatggcaatgtttagtcttggtttgt 1483
Query: 1198 tcatggcattacagccaagaatcattgcttgtggaaactcaatcgcgtcctttgcaatgg 1257
||||||||||||||||||| |||||||||||||||||||| || || | ||||||||||
Sbjct: 1484 tcatggcattacagccaaggatcattgcttgtggaaactcgattgctacttttgcaatgg 1543
Query: 1258 ctgttagattccttactggtcctgcagtaatggctgctgcttcaattgcggtaggcctac 1317
||||||||||||| |||||||||||||||||||||||||||||| |||| || || | |
Sbjct: 1544 ctgttagattcctaactggtcctgcagtaatggctgctgcttcatttgctgtcggattgc 1603
Query: 1318 gcggagttctgttgcatgtagcaatagtgcaggcagctcttccacaaggaattgttccct 1377
|||||||||||||||| |||| || ||||||||||||||||||||||| ||||| ||||
Sbjct: 1604 gcggagttctgttgcacatagccattgtgcaggcagctcttccacaagggattgtcccct 1663
Query: 1378 ttgtctttgcaaaggaatataatgttcatccagatatattgagcactgg 1426
| ||||||||||| ||||||||||||||||| || || |||||||||||
Sbjct: 1664 tcgtctttgcaaaagaatataatgttcatcctgacattttgagcactgg 1712
>29651.m000296 hypothetical protein
Length = 294
Score = 97.6 bits (49), Expect = 2e-19
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 1248 tttgcaatggctgttagattccttactggtcctgcagtaatggctgctgcttcaattgcg 1307
||||| |||||||| ||||||||||| ||||| || || ||||| |||||||| |||||
Sbjct: 49 tttgctatggctgtgagattccttacaggtccagctgtcatggcagctgcttctattgct 108
Query: 1308 gtaggcctacgcggagttctgttgcatgtagcaatagtgcaggcagctcttccacaagga 1367
|| ||||| | ||| || || ||||| || || || ||||||||||| |||||||||
Sbjct: 109 gttggccttagaggaacgctcttacatgttgccattgtccaggcagctctaccacaagga 168
Query: 1368 attgttccctttgtctttgcaaaggaata 1396
||||| |||||||||||||| ||||||||
Sbjct: 169 attgtcccctttgtctttgccaaggaata 197
>29816.m000677 Auxin efflux carrier component, putative
Length = 1941
Score = 87.7 bits (44), Expect = 2e-16
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 1140 tcaatatctatcctatccgatgcaggtcttggaatggctatgtttagtcttggattattc 1199
||||| ||||| || || ||||| |||||||||||||||||||| || | || | ||
Sbjct: 1588 tcaatctctatactgtcagatgctggtcttggaatggctatgttcagcttaggtcttttt 1647
Query: 1200 atggcattacagccaagaatcattgcttgtggaaactcaatcgcgtcctttgcaatggct 1259
||||| ||||| || | || ||||| ||||| |||||| | || | ||||||||||||
Sbjct: 1648 atggcgttacaaccgaagataattgcatgtgggaactcagtagctgcatttgcaatggct 1707
Query: 1260 gttagattccttactggtcctgcagtaatggctgctgcttcaat 1303
|| |||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1708 gtccgattccttactggtcctgcagtgatggctgcagcttcaat 1751
>29662.m000472 Auxin efflux carrier component, putative
Length = 1907
Score = 87.7 bits (44), Expect = 2e-16
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 21 actctcttttctctttccacgcttccaaacactcttgttatgggcatccctttgttaaag 80
|||||||| ||||| || || || || || ||||| || ||||| |||||| | || |||
Sbjct: 307 actctcttctctctatctactctccccaatactctggtcatgggaatccctcttttgaag 366
Query: 81 ggcatgtatggagatttttcgggaagtcttatggttcaaatagttgtcctccagtgcata 140
| |||||| ||||| ||||| || ||||||||||||||||| || || || ||| | ||
Sbjct: 367 gccatgtacggagaattttcaggtagtcttatggttcaaattgtggtgctgcagagtgta 426
Query: 141 atatggtatactttgatgctctttctatttgaatatagaggagc 184
|| ||||||||| | ||||||||| | |||||||||||||||||
Sbjct: 427 atttggtatactcttatgctctttatgtttgaatatagaggagc 470
Score = 60.0 bits (30), Expect = 4e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 1153 tatccgatgcaggtcttggaatggctatgtttagtcttggattattcatggcattacagc 1212
|||| |||||||| || |||||||||||||| ||||| || ||||||||||| || || |
Sbjct: 1574 tatcagatgcaggcctaggaatggctatgttcagtctaggtttattcatggctttgcaac 1633
Query: 1213 caagaatcattgcttgtggaaa 1234
| | || ||||||||||||||
Sbjct: 1634 cgaagattattgcttgtggaaa 1655
>27985.m000882 Auxin efflux carrier component, putative
Length = 1635
Score = 81.8 bits (41), Expect = 1e-14
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1341 atagtgcaggcagctcttccacaaggaattgttccctttgtctttgcaaaggaatat 1397
|||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||
Sbjct: 1546 atagtgcaggcagctcttccacaaggaattgtaccatttgtttttgcaagggaatat 1602
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1158 gatgcaggtcttggaatggctatgtttagtcttggattattcatggc 1204
|||||||||||||| ||||||||||| ||| | || |||||||||||
Sbjct: 1363 gatgcaggtcttggcatggctatgttcagtttagggttattcatggc 1409
>29822.m003474 conserved hypothetical protein
Length = 942
Score = 71.9 bits (36), Expect = 1e-11
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1344 gtgcaggcagctcttccacaaggaattgttccctttgtctttgcaaaggaatataatgtt 1403
|||||||||||||| || || || |||||||| ||||||||||| || ||||| || ||
Sbjct: 793 gtgcaggcagctctacctcaggggattgttccatttgtctttgctaaagaatacaacatt 852
Query: 1404 catccagatatattgagcac 1423
|||||||| |||||||||||
Sbjct: 853 catccagacatattgagcac 872