Jatropha Genome Database

JcCB0399161.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0399161.10 + phase: 2 /pseudo/partial
         (532 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013992 metalloendopeptidase, putative                          285   1e-76

>30170.m013992 metalloendopeptidase, putative
          Length = 2535

 Score =  285 bits (144), Expect = 1e-76
 Identities = 264/304 (86%)
 Strand = Plus / Plus

                                                                        
Query: 227  aatgtcccagttcatgtagttttaatggagattgtgttgatggaaggtgccactgcttcc 286
            ||||||| | |||||||| |||||| || || ||| ||||||| | ||| ||||| ||||
Sbjct: 1772 aatgtcctacttcatgtaattttaacggggactgtattgatgggaagtgtcactgtttcc 1831

                                                                        
Query: 287  taggatttcatagtcctgattgtagcaaacgatcctgccctggtaattgcaatggtcgtg 346
            ||||||||||| ||| ||||||||| ||||| || |||||||||||||||||||| ||||
Sbjct: 1832 taggatttcatggtcatgattgtagtaaacgttcttgccctggtaattgcaatgggcgtg 1891

                                                                        
Query: 347  gtgtgtgtctttcagatggggtctgtaaatgcaaaaatggttacactggcatcgactgct 406
            | ||||| || |||  ||| | |||||||||  |||||||||||||||||||||||||||
Sbjct: 1892 gagtgtgcctgtcaactggaggctgtaaatgtgaaaatggttacactggcatcgactgct 1951

                                                                        
Query: 407  ctactgctgtctgtgatgaacaatgcagccttcatggcggggtatgtgataatggagttt 466
            ||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 1952 ctactgcggtgtgtgatgaacagtgcagccttcatggtggggtatgtgataatggagttt 2011

                                                                        
Query: 467  gtgaattccgatgctcggattatgcaggttacacttgtcagaacagctccacacttctct 526
            |||| ||||| |||||||| ||||| || || || ||||||||||||||| | ||||| |
Sbjct: 2012 gtgagttccggtgctcggactatgctggctatacctgtcagaacagctcctctcttctat 2071

                
Query: 527  ctag 530
            ||||
Sbjct: 2072 ctag 2075



 Score =  238 bits (120), Expect = 3e-62
 Identities = 159/172 (92%)
 Strand = Plus / Plus

                                                                        
Query: 48   aggtgcatggcatcatcattagtacgcactgggtttgtgcggggttctgtgacccaagga 107
            ||||| ||||| ||||||||||||||||| |||||||| || ||||||||||||||||| 
Sbjct: 1537 aggtgtatggcttcatcattagtacgcacggggtttgtacgaggttctgtgacccaaggg 1596

                                                                        
Query: 108  aatggttgttatcagcacagatgtgtgaacagctcccttgaggttgctgtggatggtatt 167
            |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||
Sbjct: 1597 aatggttgttatcagcacagatgtgtaaacaactctcttgaggttgctgtggatggtatt 1656

                                                                
Query: 168  tggaaagtgtgtcctgaagctggtggaccagttcaattccctggcttcaatg 219
            |||||||  ||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 1657 tggaaagcatgtccagaagctggtggaccagttcagttccctggcttcaatg 1708