Jatropha Genome Database
- JcCB0397691.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0397691.10 - phase: 1 /partial
(698 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014359 starch branching enzyme II, putative 835 0.0
27496.m000095 starch branching enzyme II, putative 64 1e-09
>30170.m014359 starch branching enzyme II, putative
Length = 2745
Score = 835 bits (421), Expect = 0.0
Identities = 604/665 (90%)
Strand = Plus / Plus
Query: 30 gagtatttcagtgaagccacttatgttgatgctgttgtttatttgatgttggccaattct 89
|||||||||||||| || ||| ||||||| |||||||||||||||||| | |||||||||
Sbjct: 1477 gagtatttcagtgaggcaactgatgttgacgctgttgtttatttgatgcttgccaattct 1536
Query: 90 ctgattcacaacaccttgccagatgctactgtgattgccgaagacgtttcgggcatgcct 149
|||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 1537 ctgattcacaacctcttgccagatgccactgtgattgccgaagatgtttctggcatgcct 1596
Query: 150 ggacttggtcatgatgtctctgaggggggaattggttttgactatcgcttggcaatggct 209
|||||| || | |||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 1597 ggacttagttgttctgtctctgaggggggaattggttttgactatcgcctagcgatggcc 1656
Query: 210 atccctgacaaatggatagattacttgaaaaacaagagtgatgaagagtggtcaatggag 269
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1657 atccctgacaaatggattgattacttgaaaaacaagactgatgaagagtggtcaatggga 1716
Query: 270 gaaattgcatggagcttaactaataggaggtacactgagaaatgtgttgcttatgctgag 329
|| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1717 gatatttcatggagcttaactaataggagatacacagagaaatgtgttgcttatgctgag 1776
Query: 330 agtcatgaccaagccattgttggtgacaagacagttgcctttttgctaatggataaagaa 389
|||||||||||||||||||| |||||||||||| | ||||| || || ||||||| ||||
Sbjct: 1777 agtcatgaccaagccattgtgggtgacaagacaatcgccttcttactgatggatacagaa 1836
Query: 390 atgtattctggaatgtcttgcttgacagatgctccacctatcattgagcgagggatagca 449
||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1837 atgtattctgggatgtcttgcttgacagatgctccacctactgttgaacgagggatagca 1896
Query: 450 cttcacaagatggtacattttttaactatggcattaggcggtgagggctaccttaatttt 509
||||| |||||| | ||| ||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1897 cttcataagatgattcatcttttaacaatggcattaggaggtgagggctaccttaatttt 1956
Query: 510 atgggaaacgagtttggccatcctgagtggattgacttcccaagagaaggcaatgggtgg 569
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 1957 atgggaaatgagtttggccatcccgagtggattgacttcccaagagaaggcaatggatgg 2016
Query: 570 agttatgataagtgcagacgccaatggaacctagttgacactgaacacttgagatacaag 629
||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||
Sbjct: 2017 agttatgataagtgcagacgccaatggaatttagttgacaccgaacacttgagatataag 2076
Query: 630 ttcatgaatgcatttgacagagctatgaatgggcttgatgaaaagtattcgtttcttgca 689
||||||||||||||||| | ||||||||| ||||||||||||| ||||||| ||| ||
Sbjct: 2077 ttcatgaatgcatttgataaagctatgaacttgcttgatgaaaagcattcgttcctttca 2136
Query: 690 tcaac 694
|||||
Sbjct: 2137 tcaac 2141
>27496.m000095 starch branching enzyme II, putative
Length = 2592
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 504 aattttatgggaaacgagtttggccatcctgagtggattgacttcccaagag 555
|||||||||||||| || ||||| ||||||||||||||||| || |||||||
Sbjct: 1993 aattttatgggaaatgaatttgggcatcctgagtggattgattttccaagag 2044
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 312 tgtgttgcttatgctgagagtcatgaccaagccattgttggtgacaagacagttgccttt 371
|||||||| |||||||| |||||||||||||| |||| |||||||| || ||||||||
Sbjct: 1801 tgtgttgcctatgctgaaagtcatgaccaagctcttgtcggtgacaaaaccattgccttt 1860
Query: 372 t 372
|
Sbjct: 1861 t 1861