Jatropha Genome Database

JcCB0396881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0396881.10 + phase: 0 /pseudo/partial
         (281 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001168 protein phosphatase 2c, putative                        107   3e-23

>30075.m001168 protein phosphatase 2c, putative
          Length = 987

 Score =  107 bits (54), Expect = 3e-23
 Identities = 180/222 (81%)
 Strand = Plus / Plus

                                                                       
Query: 31  gaagaagaggaagaggagaaggagccttcaagtgaaagcaccagccacgggtaccatatg 90
           |||||||| ||||| ||  | |||||||||||| ||   || || ||||| || ||||||
Sbjct: 88  gaagaagaagaagaagaagaagagccttcaagtaaacatactaggcacggttatcatatg 147

                                                                       
Query: 91  gttagaggaaaaatggggcatggaatggaagattatttagtggcagaaagtagagaaatc 150
           |||||||| |||||||  |||||||||||||||||  |||| |||||||  ||| |||||
Sbjct: 148 gttagagggaaaatggatcatggaatggaagattacgtagtagcagaaaagagaaaaatc 207

                                                                       
Query: 151 aatggttacaggttagggctatatgcaatttttgatggccactctggtcttgatgttgcc 210
           |||||  | |  || || || || || ||||||||||| |||||||||| ||||||||| 
Sbjct: 208 aatggccataacttgggcctctacgcgatttttgatggtcactctggtcgtgatgttgct 267

                                                     
Query: 211 aaatacttgcaatcccacctattcgataacttattgaacgag 252
           || ||||||||||| || || || |||||| | |||||||||
Sbjct: 268 aagtacttgcaatcacatctgtttgataacattttgaacgag 309