Jatropha Genome Database
- JcCB0394911.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0394911.10 - phase: 0 /partial
(1419 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29727.m000488 DNA binding protein, putative 1239 0.0
>29727.m000488 DNA binding protein, putative
Length = 4125
Score = 1239 bits (625), Expect = 0.0
Identities = 1213/1402 (86%), Gaps = 14/1402 (0%)
Strand = Plus / Plus
Query: 1 gcaattgaatctggccggttgcctggagatattctggatgatatacctcgcaaatatgtt 60
|||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 352 gcaattgagtctggccggttgcctggagatattctggatgatataccatgcaagtatgtc 411
Query: 61 aatgggacactcatttgtgaggtacgagattatcgaaaatgtcctcctgagcaaggttct 120
|| || |||||||| |||||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 412 aacggcacactcatgtgtgaggtgcgggattatcgaaaatgtgttcctgagcaaggttct 471
Query: 121 tgtattccatctgtaggctgg-ctccctattgtaaatagagtgcgcctcagaatgtcatt 179
||||||||||| | | ||| |||||||||||||||||||| || ||||| ||||| ||
Sbjct: 472 agtattccatctat-gaatggactccctattgtaaatagagtacgtctcaggatgtcttt 530
Query: 180 ggagaatgtagtgaaggatatcccattgatctcagataattcttggacttatggtgattt 239
||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 531 ggagaatgtagtgaaggatattccattactctcagataattcttggacttatggtgattt 590
Query: 240 gatggaagtggaatcccggatattgaaagccttgcaaccacgtctttttctagatcctac 299
|||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||
Sbjct: 591 gatggaagtggaatcccggatattgaaagccttgcagccacaactttgtctagatcctac 650
Query: 300 tcccaaattggataggctttgtaataacccaactgccacaaacctcaatttaggtctgag 359
||| |||||||||||||| |||||| ||||| || | ||||| || | ||||||| ||||
Sbjct: 651 tccgaaattggataggctctgtaatgacccagctcctacaaagctgagtttaggtatgag 710
Query: 360 cagcttgcgacgaaaaagattgaggcagatgcctgaagttacggtcacgtctagcagcag 419
||| ||||| |||||||||| |||||||||||||||||||| ||||| |||| |||||
Sbjct: 711 cagtttgcggagaaaaagattaaggcagatgcctgaagttactgtcacatctaatagcag 770
Query: 420 aatccatgggaagaaagtttgcatagatcgagtgctagaaagctccaacagcaggttagg 479
||||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||||
Sbjct: 771 aatccatggcaagaaagtttgcatagatcgagtgccagaaagctcaaatggcaggttagg 830
Query: 480 agattcaggaatgatctctggcaatatgatgccgcagagtgtccaggagaatctgaccac 539
|||||||| ||| || || || |||||| |||| || |||| |||||||||||||| ||
Sbjct: 831 agattcagcaatcatttccgggaatatgttgccacaaagtggtcaggagaatctgactac 890
Query: 540 tcaaaaccttgttccaaaca---tgttacccttacgagcaagaagctttgtatctgatgg 596
||||||||||| ||||| || ||||| | || |||||||||||||| |||| |||||
Sbjct: 891 tcaaaaccttggtccaagcaacctgttagctctaggagcaagaagctttatatcagatgg 950
Query: 597 caatgtttcagcactccctttggtatcacagcaatcaaggtatcagttggggttaggaac 656
||||||| ||||| | ||||||||| ||||||||||||||||||| ||||| | | ||
Sbjct: 951 caatgttccagcaatgcctttggtagcacagcaatcaaggtatcaaatgggggtgagtac 1010
Query: 657 cccaagaagtatgcaggatcaggggtcagggtctcttgttaacattccaggagcttcccc 716
||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 1011 cccaagaagtatgcaggatcaagggtcagggtctcttgttaatatttcaggagcttcccc 1070
Query: 717 tgctgggcaggacatgatgatcacatatggtgaccatattaattctggtgcttctcttca 776
||| |||||| |||||||| ||||||||||| ||| ||| |||| ||||| |||||
Sbjct: 1071 tgccacgcaggatatgatgattgcatatggtgacactatgaatcctggggcttcacttca 1130
Query: 777 tggtaagagggagaatcaagatgggcaaatgtcacccttatctagttttaataagagggc 836
| |||| | |||||||||||||||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 1131 tagtaaaaaggagaatcaagatgggcaaatgtctcccttatccagtttgaataagagagc 1190
Query: 837 aagggtcacctcagtaggtcctgatggaatgcaacagcagcaattaggaccacatatcga 896
||| | |||||||| | ||||||||| || || |||||||| |||| ||| | || ||
Sbjct: 1191 taggcttacctcagtggctcctgatgggattcatcagcagcagatagggccaaacatgga 1250
Query: 897 tggtctccatgcatcagatatgaactggaagaattctttattaccgcaccaagcaacagc 956
| || | ||||||||||| |||||||||| ||||||||| ||| || || |||| ||
Sbjct: 1251 tagtgttaatgcatcagatttgaactggaaaaattctttactacatcaacaggcaatggc 1310
Query: 957 aagagggattcactatgctaatacaggcattcagaagtatccccagcaggtgtttgaagg 1016
|||||| ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||
Sbjct: 1311 aagaggaattcactatgctaatgcaggtattcagaagtatccccagcagatgtttgaagg 1370
Query: 1017 ggttatgaatcaaaatgctatgccaacatcattttctgctccacagcaaggtgtaagatt 1076
||||||||||||||||||| ||||| |||||||||||||| |||||| |||| |||||||
Sbjct: 1371 ggttatgaatcaaaatgctgtgccagcatcattttctgctgcacagccaggtttaagatt 1430
Query: 1077 tggtccaaaggaagagcagtttgaaacagaaaagttagatgtctcagagctcaatcaggg 1136
|||||| |||||||| |||||||||||||||||| | |||| ||||||| ||| ||||||
Sbjct: 1431 tggtccgaaggaagaacagtttgaaacagaaaagctggatggctcagagatcagtcaggg 1490
Query: 1137 taaaaatgatat---ga---tggatacagaaatgggccatctggaccaacagccatcacg 1190
|||||||||||| || |||| ||||||| |||||||| |||| || |||||
Sbjct: 1491 taaaaatgatatccagatcttggagacagaaacaggccatcttgaccctcaagtgtcacg 1550
Query: 1191 gttacaacaaagattaccacctcatctcatgagatctaatttctctcagacagcctggaa 1250
| ||||||||||||||||||| |||| |||||||||||||||| ||||| |||| |||||
Sbjct: 1551 gctacaacaaagattaccaccacatcacatgagatctaatttccctcaggcagcatggaa 1610
Query: 1251 caatctaagccaagattcaaggaaggaggaacaaattcaaggaaagaggaaaacagtgca 1310
|||||| |||||||||||||||||||| || | ||||| || ||||||||||| |||||
Sbjct: 1611 caatcttagccaagattcaaggaaggatgatc-aattccag--aagaggaaaactgtgca 1667
Query: 1311 aagtcctaggttatctgctggaacttttcctcaatcaccattatcttcaaaatctgggga 1370
||||||| ||||||| ||||| |||| |||||||||||||| || || |||||||| ||
Sbjct: 1668 aagtcctcggttatcagctggggctttgcctcaatcaccattgtcatctaaatctggaga 1727
Query: 1371 attttctagtggttctgctggg 1392
|||||||||||| |||||||||
Sbjct: 1728 attttctagtggctctgctggg 1749