Jatropha Genome Database
- JcCB0389841.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0389841.10 + phase: 2 /partial
(973 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30150.m000471 malate dehydrogenase, putative 842 0.0
29900.m001590 malate dehydrogenase, putative 281 4e-75
28830.m000233 malate dehydrogenase, putative 82 7e-15
30099.m001624 malate dehydrogenase, putative 66 4e-10
>30150.m000471 malate dehydrogenase, putative
Length = 1038
Score = 842 bits (425), Expect = 0.0
Identities = 740/845 (87%)
Strand = Plus / Plus
Query: 125 tcttctcacctcctccgtcgtggctatggctctgaggccgtccccgatcggaaggtcgct 184
||||||||||||||||| |||||||| | ||| ||||| ||||| ||||| ||||| |||
Sbjct: 52 tcttctcacctcctccgccgtggctacgcctccgaggctgtccctgatcgtaaggtggct 111
Query: 185 gtccttggtgccgccggtggaattggtcagccattggctttgctcatgaagcttaatcct 244
|| || || ||||| ||||| || ||||| ||| | || | |||||||||||||| |||
Sbjct: 112 gtactcggcgccgctggtggtatcggtcaaccacttgcccttctcatgaagcttaaccct 171
Query: 245 ctcgtatctaaccttgctctctacgatattgctaacacccctggagtcgccgccgatgtt 304
||||| || || || ||||| || ||||||||||||||||| || ||||| || ||||||
Sbjct: 172 ctcgtctcaaatctcgctctgtatgatattgctaacaccccaggtgtcgcagctgatgtt 231
Query: 305 agccacatcaataccagatctgaggttaaagggtatgtaggagaagatcaattggggcaa 364
||||||||||||||||||||||| || ||||| ||||| ||||| |||||| | ||| ||
Sbjct: 232 agccacatcaataccagatctgatgtgaaaggatatgtgggagaggatcaactagggaaa 291
Query: 365 gccttggaaggatctgatgttgtgatcattccagctggtgtgccaaggaagcctggaatg 424
|| ||||| ||||| |||||||| || |||||||||||||| ||||| || |||||||||
Sbjct: 292 gcattggagggatcagatgttgtaataattccagctggtgtcccaagaaaacctggaatg 351
Query: 425 acccgtgatgatctgttcaacatcaatgctggaattgttaagggactctgtcaagcaatt 484
|| ||||||||||| ||||| || |||||||||||||| ||||| ||||| ||||||||
Sbjct: 352 acacgtgatgatctcttcaatattaatgctggaattgtcaagggtctctgcgaagcaatt 411
Query: 485 tccaagtactgtcctaatgcacttgttaatatgattagcaaccctgtgaattcgactgtg 544
|||||||||| |||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 412 gccaagtactgccctaatgcgcttgttaatatgattagcaaccctgtgaattcaacggta 471
Query: 545 cccattgcagctgaagttttcaaaaaggcaggaacctatgatgagaaaagattgtttggt 604
|| ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 472 cctattgccgctgaggttttcaagaaggcaggaacttatgatgagaaaagattgtttggc 531
Query: 605 gtaacaacccttgacgttgttagggccaagactttctatgctggaaaggccaaggttcca 664
||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gtaactacccttgatgtggttagggccaagactttctatgctggaaaggccaaggttcca 591
Query: 665 gttgcagaggttaatgtaccagttgttggtggccatgccggcatcaccattcttccacta 724
|||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 592 gttgcagaggttaatgtaccagttgttggtggccatgcaggcataaccattctcccactc 651
Query: 725 ttttcacaggccacaccaaaagccaatttgtcaagtgaagatattgaagctcttacaaag 784
||||||| ||||| ||||||||||||||| || |||||| |||| ||||||||||||
Sbjct: 652 ctttcacaagccactccaaaagccaatttgccagatgaagaaattgttgctcttacaaag 711
Query: 785 agaactcaagatggagggacggaagttgtggaagcaaaggctggaaagggctctgcaact 844
||||||||||||||||| || || ||||| |||||||||||||||||||| ||||||||
Sbjct: 712 agaactcaagatggaggcactgaggttgtagaagcaaaggctggaaagggatctgcaaca 771
Query: 845 ctgtcaatggcctatgctggagccatcttcgctgatgcttgcttgaaaggactgaatgga 904
|||| ||||||||||| || ||||| || ||||||||||||||||| ||||| |||||
Sbjct: 772 ttgtccatggcctatgcaggtgccatatttgctgatgcttgcttgaagggactcaatggt 831
Query: 905 gttccagatgttgtggaatgtacatttgtgcaatcaagtgttactgaacttccattcttt 964
||||||||||| || |||||| |||||||||| |||| ||| ||||||||||| ||||||
Sbjct: 832 gttccagatgtggttgaatgttcatttgtgcagtcaactgtcactgaacttcctttcttt 891
Query: 965 gcttc 969
|||||
Sbjct: 892 gcttc 896
>29900.m001590 malate dehydrogenase, putative
Length = 1032
Score = 281 bits (142), Expect = 4e-75
Identities = 609/764 (79%), Gaps = 3/764 (0%)
Strand = Plus / Plus
Query: 206 attggtcagccattggctttgctcatgaagcttaatcctctcgtatctaaccttgctctc 265
|||||||||||||||||||| || |||||| | || || || || ||| ||| | ||
Sbjct: 121 attggtcagccattggctttacttatgaagttgaacccactagtttcttctctttccctt 180
Query: 266 tacgatattgctaacacccctggagtcgccgccgatgttagccacatcaataccagatct 325
|| ||||| |||||||| ||||| || || || ||||||||||||||||| | | |
Sbjct: 181 tatgatatagctaacactcctggtgttgctgctgatgttagccacatcaactctcgcgcc 240
Query: 326 gaggttaaagggtatgtaggagaagatcaattggggcaagccttggaaggatctgatgtt 385
||||| |||||||| ||| ||||| || | || ||||| ||||| |||||||| ||
Sbjct: 241 caggtttcagggtatgcaggtgaagaacagctaggacaagcattggagggatctgacatt 300
Query: 386 gtgatcattccagctggtgtgccaaggaagcctggaatgacccgtgatgatctgttcaac 445
||||| |||||||| ||||| ||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 301 gtgattattccagcaggtgttccaagaaaacctggaatgactcgtgatgatctattcaac 360
Query: 446 atcaatgctggaattgttaagggactctgtcaagcaatttccaagtactgtcctaatgca 505
|||||||| || |||||||| | || ||| || |||| ||||| || ||||||
Sbjct: 361 atcaatgcggggattgttaaatctttatgcacagccatagccaaatactgccccaatgca 420
Query: 506 cttgttaatatgattagcaaccctgtgaattcgactgtgcccattgcagctgaagttttc 565
|| ||||||||||| || ||||| |||||||| || ||||| || || || |||||||||
Sbjct: 421 ctggttaatatgataagtaacccagtgaattcaacagtgccgatagctgcagaagttttc 480
Query: 566 aaaaaggcaggaacctatgatgagaaaagattgtttggtgtaacaacccttgacgttgtt 625
|| || ||||| || ||||||||||| | |||||||||| || || ||||| || ||
Sbjct: 481 aagaaagcagggacatatgatgagaagaagctgtttggtgtcactacacttgatgtcgtc 540
Query: 626 agggccaagactttctatgctggaaaggccaaggttccagttgcagaggttaatgtacca 685
|| || || |||||||||| ||||||||| || || | || || |||||| |||| ||
Sbjct: 541 agagctaaaactttctatggtggaaaggctaaagtggctgtggctgaggttgatgtgcct 600
Query: 686 gttgttggtggccatgccggcatcaccattcttccactattttcacaggccacaccaaaa 745
|| |||||||| ||||| ||||| |||||||| || || || || ||||||||||||||
Sbjct: 601 gtggttggtggtcatgctggcataaccattctccctctcttctctcaggccacaccaaag 660
Query: 746 gccaat---ttgtcaagtgaagatattgaagctcttacaaagagaactcaagatggaggg 802
||||| ||||||| ||| || || | || ||||| |||||||| || ||||| ||
Sbjct: 661 tccaatggtttgtcaaatgaggacataaaggcgcttactaagagaacacaggatggggga 720
Query: 803 acggaagttgtggaagcaaaggctggaaagggctctgcaactctgtcaatggcctatgct 862
|| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||||||
Sbjct: 721 acagaagtggtggaagcaaaagcaggaaaaggatctgcaactctttcaatggcctatgca 780
Query: 863 ggagccatcttcgctgatgcttgcttgaaaggactgaatggagttccagatgttgtggaa 922
||||| |||| ||||||||||| || || || || ||||||||||||||| |||| |||
Sbjct: 781 ggagctgtctttgctgatgcttgtttaaaggggcttaatggagttccagatattgttgaa 840
Query: 923 tgtacatttgtgcaatcaagtgttactgaacttccattctttgc 966
|| | ||||||||||||||||| |||||| | || ||||||||
Sbjct: 841 tgctcttttgtgcaatcaagtgtcactgaattacctttctttgc 884
>28830.m000233 malate dehydrogenase, putative
Length = 999
Score = 81.8 bits (41), Expect = 7e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 384 ttgtgatcattccagctggtgtgccaaggaagcctggaatgacccgtgatgatctgttca 443
||||||||||||| |||||||| || || || || |||||||| | |||||||||||||
Sbjct: 272 ttgtgatcattcctgctggtgttcctagaaaaccaggaatgacaagagatgatctgttca 331
Query: 444 acatcaatgctggaattgtta 464
|||||||||||||||| ||||
Sbjct: 332 acatcaatgctggaatagtta 352
>30099.m001624 malate dehydrogenase, putative
Length = 1071
Score = 65.9 bits (33), Expect = 4e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 398 gctggtgtgccaaggaagcctggaatgacccgtgatgatctgttcaacatcaatgctgga 457
||||||||||||||||| ||||| ||||| | ||||||||||| ||||| ||||||||
Sbjct: 358 gctggtgtgccaaggaaacctggcatgactagggatgatctgtttaacattaatgctggg 417
Query: 458 attgt 462
|||||
Sbjct: 418 attgt 422