Jatropha Genome Database
- JcCB0389821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0389821.10 - phase: 1 /partial
(1310 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27647.m000179 two-component sensor histidine kinase bacteria, pu... 932 0.0
30147.m014309 two-component system sensor histidine kinase/respo... 80 4e-14
29929.m004752 two-component sensor histidine kinase bacteria, pu... 54 2e-06
>27647.m000179 two-component sensor histidine kinase bacteria,
putative
Length = 2010
Score = 932 bits (470), Expect = 0.0
Identities = 928/1076 (86%), Gaps = 26/1076 (2%)
Strand = Plus / Plus
Query: 4 cttcttctgttaatgaaggaacagaaggatttttgaaatgtcagaaaaagaggagcagtc 63
|||||||||||||||||||||| |||||| |||||||| ||||||||| ||||||| |
Sbjct: 572 cttcttctgttaatgaaggaacggaaggagttttgaaaggtcagaaaagaaggagcaatt 631
Query: 64 ctaaagacgaggatgatgctgaacaggaaaatgatgatccttccacatcaaagaaaccac 123
||||||| |||||||||| ||||| ||| | ||||||||| |||||||||||||||||||
Sbjct: 632 ctaaagatgaggatgatggtgaaccggatagtgatgatccctccacatcaaagaaaccac 691
Query: 124 gtgttgtatggtcagtggagctccatcaacaatttgtcagtgccgtaaaccagcttggaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtgttgtatggtcagtggagctccatcaacaatttgtcagtgccgtaaaccagcttggaa 751
Query: 184 ttgataaggctgtacctaagagaattctagaattgatgaatgtacctggtttaactagag 243
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 752 ttgataaggctgtacccaagagaattctagaattgatgaatgtacctggtttaaccagag 811
Query: 244 aaaatgttgcaagtcatttgcagaaatttagattatatctgaagaggctaagtggggttg 303
|||||||||| |||||||||||||| ||||| |||||||||||||| ||||||| ||||
Sbjct: 812 aaaatgttgctagtcatttgcagaagtttaggctatatctgaagaggttaagtggagttg 871
Query: 304 ctcaacaaggtggaatatctaatacattttgtggtcccttggactcaaatgggaaactta 363
||||||||||||| || |||| |||||| ||||||||| ||||||| || | ||||||||
Sbjct: 872 ctcaacaaggtgggatttctagtacattctgtggtcccatggactcgaacgtgaaactta 931
Query: 364 attcacttggaagatttgacatacaagctttggctgcctcgggccagattccaccacaaa 423
||||||| ||||||||||||||||||||||||||||| || || |||||||| |||||||
Sbjct: 932 attcactcggaagatttgacatacaagctttggctgcatcaggtcagattcctccacaaa 991
Query: 424 cattagcagcactgcatgccgagctttttggtcgaccaacaagtagcttagttacaacaa 483
|||||||||| |||||||| ||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 992 cattagcagcgctgcatgcggagctttttggccgaccaacaggtagcctagttacaacaa 1051
Query: 484 tggaccaaccagctcttttacaggcatccatacagggtcccaagtgtattcctgttgaac 543
||||||| ||| |||||||||| ||||||| || |||| || ||||||||||||||||
Sbjct: 1052 tggaccagccaactcttttacaagcatccaggcaaagtccgaaatgtattcctgttgaac 1111
Query: 544 atggtgtggcatttgggcagccattagtaaaatgc-caaccgagtatttccaaacatttt 602
|||||||| | ||||| |||||| ||||||||||| || ||| ||||||| |||||||||
Sbjct: 1112 atggtgtgacgtttggtcagccaatagtaaaatgctcatccg-gtatttcaaaacatttt 1170
Query: 603 ccgaaaaatattgtatccgttgaagatgttgcttcaggatttggagcctggccttctaat 662
|| ||||||| || ||||||||||| ||| ||||||||| |||||| ||||||||||||
Sbjct: 1171 ccacaaaatatggtgtccgttgaagaagtttcttcaggatatggagcatggccttctaat 1230
Query: 663 aaccttggcactgtagggcccaataccaaccttggatgtatcaccactcaaaatgggaac 722
| || ||||| |||||||| | |||||| || || |||| || ||||| ||||| |||
Sbjct: 1231 agtctgggcacagtagggcctagtaccaatctgggcggtatgactactcagaatggcaac 1290
Query: 723 atgttaatggatatattacatcag---------cagcagcaacca---cagcagcagtca 770
||||| ||||||||||| || ||| |||||||||||| ||||||||||||
Sbjct: 1291 atgttgatggatatattccaccagcagcagaaacagcagcaaccacagcagcagcagtca 1350
Query: 771 ataccagagactggccgttcaatcaatgtgcaaccatcctgccttgttgtcccttctcag 830
| |||| | |||||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 1351 ctggcagatcccagccgttcaattaatgtgcagccatcttgtcttgtggtcccttctcaa 1410
Query: 831 tcatcagccagtttccaggcgggaaattgtcctgcttccatcaatcagaattgcaacttc 890
||||||||| |||| ||||| |||||| |||||||||| | ||||||| |||||||
Sbjct: 1411 tcatcagcctgttttcaggcaggaaatagtcctgcttcagttaatcaga---gcaacttt 1467
Query: 891 aaccggggtgctgttattgattacagtcttctgtcctctcaatcaaataatac------a 944
||| || || ||||||||||| || |||||||| ||||||||||||||| |
Sbjct: 1468 aacaggaatgtggttattgattatagccttctgtcatctcaatcaaataattctgcattg 1527
Query: 945 aatattggacacatacgggacggggatctaaaaaatacaggtgtagtcagtgggtattca 1004
|||||||||||||||| || |||||| |||||| |||||||| || | ||||||||||
Sbjct: 1528 aatattggacacatacctgaaggggatttaaaaactacaggtgctgttaatgggtattca 1587
Query: 1005 gcccctggttctatatctc--cca-catcatcatgctctgtcaatgcagacagtgg 1057
||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||
Sbjct: 1588 gcccctggttcattatctcctccagcatcatcatgctctgtcaatgctgacagtgg 1643
>30147.m014309 two-component system sensor histidine kinase/response
regulator, putative
Length = 2265
Score = 79.8 bits (40), Expect = 4e-14
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 184 ttgataaggctgtacctaagagaattctagaattgatgaatgtacctggtttaactagag 243
|||| |||||||| || ||||||||||| ||||| |||||||| || || | |||||||
Sbjct: 686 ttgacaaggctgtcccaaagagaattcttgaatttatgaatgtgccagggctcactagag 745
Query: 244 aaaatgttgcaagtcatttgcagaaatttagattat 279
||||||| || || ||||||||||||| ||||||||
Sbjct: 746 aaaatgtcgctagccatttgcagaaatatagattat 781
>29929.m004752 two-component sensor histidine kinase bacteria,
putative
Length = 1755
Score = 54.0 bits (27), Expect = 2e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 216 ttgatgaatgtacctggtttaactagagaaaatgttgcaagtcatttgcagaaat 270
||||||||||| || | || || ||||||||||||||||| |||||||||||||
Sbjct: 691 ttgatgaatgtgccatggttgacaagagaaaatgttgcaagccatttgcagaaat 745