Jatropha Genome Database
- JcCB0381221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0381221.10 + phase: 0 /pseudo/partial
(1056 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006276 Casbene synthase, chloroplast precursor, putative 194 7e-49
30169.m006283 Casbene synthase, chloroplast precursor 82 8e-15
30169.m006286 Casbene synthase, chloroplast precursor, putative 82 8e-15
>30169.m006276 Casbene synthase, chloroplast precursor, putative
Length = 1845
Score = 194 bits (98), Expect = 7e-49
Identities = 625/801 (78%), Gaps = 6/801 (0%)
Strand = Plus / Plus
Query: 232 gatctctatacggttgccgtgatatttcgagtatttagacaacatggcttcaaaatcact 291
||||||||||| ||||| | |||||||||| || ||||| ||||| |||||||| ||
Sbjct: 463 gatctctatactgttgcacttgtatttcgagttttcagacagcatggtttcaaaatgtct 522
Query: 292 tccgatgtgttcaacaagttcaaggatagagatggtaagttcaaggaatccctgctaagt 351
|| |||||||| |||| |||| ||| || ||||||| ||||||| |||||||||||
Sbjct: 523 tctaatgtgttccacaaattcacggacagccatggtaaattcaaggcttccctgctaagc 582
Query: 352 gatgtcaaaggtatattaagcctttttgaagctacacatctgagcatgcctaacgaagct 411
|||| ||||||||| | |||||||||||||||| ||| | ||||||| | ||||
Sbjct: 583 gatgccaaaggtatgctcagcctttttgaagctagccatttaagcatgcatggagaagac 642
Query: 412 attttagatgaggcctttgctttcactaaggctttcttggaatcttctgcggttaag--- 468
||| | ||||| |||||||||||||| |||| || |||||| || ||||| ||| |
Sbjct: 643 attcttgatgaagcctttgctttcaccaaggattacttggagtcctctgcagttgaccag 702
Query: 469 ---tcattccctaattttgcaaggcatattggtagtgcactagagcagccagtacacaaa 525
| || ||||||| || || |||||| || || || |||||||| | ||||||
Sbjct: 703 tacttatgccctaatcttcaaaagcatataactaacgccctggagcagcctttccacaaa 762
Query: 526 ggcataccaaggttagaggcaagaaaatatatcgatttgtacgaggttgatgaaagtcga 585
||||||||||| ||||||| || ||||| || || | ||||| | || ||| | |||
Sbjct: 763 ggcataccaagactagaggccaggaaatacattgacctatacgaaggcgacgaatgccga 822
Query: 586 aatgaaactgtactagagcttgcaaagttggattttaatagagtgcaattactacaccaa 645
|||||||| ||||| ||| ||||||||||||| | ||||||||| |||||| ||||||||
Sbjct: 823 aatgaaacagtactcgagtttgcaaagttggactataatagagtacaattattacaccaa 882
Query: 646 gaagaattaagtcaattctcaaagtggtggaagaatttgaatattactaggcaggtttct 705
|||| |||| || ||||||| ||||||||| | | ||| || || | || || ||
Sbjct: 883 caagagctaagccagttctcaacgtggtggaaagacctcaatcttgcttcggagattcct 942
Query: 706 tatgcaagaaatagaatggcggaaatcttcttttgggcggtttctatgtattctgagccg 765
||||||||| | |||||||| ||||| ||||||||||| ||| | ||||||| ||||||
Sbjct: 943 tatgcaagagacagaatggcagaaattttcttttgggctgttgcaatgtattttgagcct 1002
Query: 766 caatatgcaaaggctagaatgatagtctcgaaagttgtatcacttatatcactaatagac 825
| |||||| | ||| ||||||| | | |||||||||| || |||||||| ||||
Sbjct: 1003 aagtatgcacaagctcgaatgattattgctaaagttgtattgctcatatcacttgtagat 1062
Query: 826 gacacaattgatgcatatgcaactattgaagaaattcactgtcttgcttatgcaatcgaa 885
|| ||| ||||||||||||| ||||||||||||| || |||||| | ||| |||||
Sbjct: 1063 gatacatttgatgcatatgccactattgaagaaacccatcttcttgcagaagcattcgaa 1122
Query: 886 aggtgggatatgagcttagtcaatcggctaccaaattacatgaaagtaatctataagtta 945
|||||||||| ||||| | ||| ||| ||| ||||||||||||| |||||||| ||
Sbjct: 1123 aggtgggataagagctgcctggatcagctgccagattacatgaaagttatctataaacta 1182
Query: 946 attctcaacacgtttgatgaatttgaaaaagatttggaagcagaagggaagtcctatagt 1005
| || ||||| ||| ||||||||| || ||||||| | || || ||||||||||||
Sbjct: 1183 ttgctaaacaccttttctgaatttgagaatgatttggcaaaggagggaaagtcctatagt 1242
Query: 1006 gtcaagtatggaagggaagcg 1026
|||| ||||| |||||||||
Sbjct: 1243 gtcagatatgggagggaagcg 1263
>30169.m006283 Casbene synthase, chloroplast precursor
Length = 1806
Score = 81.8 bits (41), Expect = 8e-15
Identities = 499/651 (76%), Gaps = 3/651 (0%)
Strand = Plus / Plus
Query: 254 tatttcgagtatttagacaacatggcttcaaaatcacttccgatgtgttcaacaagttca 313
|||| ||||| || ||||| ||||| || ||||| |||| |||||||| | ||| ||||
Sbjct: 491 tattccgagttttcagacagcatggttttaaaatgtcttcggatgtgtttagcaaattca 550
Query: 314 aggatagagatggtaagttcaaggaatccctgctaagtgatgtcaaaggtatattaagcc 373
|||| || ||||||||||||||||||||||| | |||||| || ||||| | ||||
Sbjct: 551 aggacagtgatggtaagttcaaggaatccctacggggtgatgctaagggtatgctcagcc 610
Query: 374 tttttgaagctacacatctgagcatgcctaacgaagctattttagatgaggcctttgctt 433
||||||||||| | ||||| || ||| | |||| ||| | || || ||||||||||
Sbjct: 611 tttttgaagcttcccatctaagtgtgcatggagaagacattcttgaagaagcctttgctt 670
Query: 434 tcactaaggctttcttggaatcttctgcggttaagtcattccctaattttgcaaggcata 493
|||| |||| || ||| | || ||||| ||| ||| |||||||||| | ||||||||
Sbjct: 671 tcaccaaggattacttacagtcctctgcagttgagttattccctaatctcaaaaggcata 730
Query: 494 ttggtagtgcactagagcagccagtacacaaaggcataccaaggttagaggcaagaaaat 553
| | || ||||||||||| | |||| ||| | || ||| ||||||| || ||||
Sbjct: 731 taacgaacgccctagagcagcctttccacagtggcgtgccgaggctagaggccaggaaat 790
Query: 554 atatcgatttgtacgaggttgat---gaaagtcgaaatgaaactgtactagagcttgcaa 610
|||||| | ||||| | |||| ||| | || ||||||||| | || ||| ||||||
Sbjct: 791 tcatcgatctatacgaagctgatattgaatgccggaatgaaactctgctcgagtttgcaa 850
Query: 611 agttggattttaatagagtgcaattactacaccaagaagaattaagtcaattctcaaagt 670
||||||||| ||||||||| || ||| | |||||| |||| | | || ||||||||||
Sbjct: 851 agttggattataatagagttcagttattgcaccaacaagagctgtgccagttctcaaagt 910
Query: 671 ggtggaagaatttgaatattactaggcaggtttcttatgcaagaaatagaatggcggaaa 730
||||||| | ||||| || || | | || ||||||||||| | |||||||| || |
Sbjct: 911 ggtggaaagacctgaatcttgcttcggatattccttatgcaagagacagaatggcagaga 970
Query: 731 tcttcttttgggcggtttctatgtattctgagccgcaatatgcaaaggctagaatgatag 790
| ||||||||||| || | ||||| | |||||| | |||||| | | |||||||
Sbjct: 971 ttttcttttgggcagtcgcgatgtactttgagcctgactatgcacacacccgaatgatta 1030
Query: 791 tctcgaaagttgtatcacttatatcactaatagacgacacaattgatgcatatgcaacta 850
| |||| ||||||| ||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 1031 ttgcgaaggttgtattgcttatatcactaatagatgatacaattgatgcgtatgcaacaa 1090
Query: 851 ttgaagaaattcactgtcttgcttatgcaatcgaaaggtgggatatgagct 901
| || |||| ||| ||||||| | ||| ||| ||||||||| |||||||
Sbjct: 1091 tggaggaaactcatattcttgctgaagcagtcgcaaggtgggacatgagct 1141
>30169.m006286 Casbene synthase, chloroplast precursor, putative
Length = 1800
Score = 81.8 bits (41), Expect = 8e-15
Identities = 499/651 (76%), Gaps = 3/651 (0%)
Strand = Plus / Plus
Query: 254 tatttcgagtatttagacaacatggcttcaaaatcacttccgatgtgttcaacaagttca 313
|||| ||||| || ||||| ||||| || ||||| |||| |||||||| | ||| ||||
Sbjct: 485 tattccgagttttcagacagcatggttttaaaatgtcttctgatgtgtttagcaaattca 544
Query: 314 aggatagagatggtaagttcaaggaatccctgctaagtgatgtcaaaggtatattaagcc 373
|||| || ||||||||||||||||||||||| | |||||| || ||||| | ||||
Sbjct: 545 aggacagtgatggtaagttcaaggaatccctacggggtgatgctaagggtatgctcagcc 604
Query: 374 tttttgaagctacacatctgagcatgcctaacgaagctattttagatgaggcctttgctt 433
||||||||||| | ||||| || ||| | |||| ||| | || || ||||||||||
Sbjct: 605 tttttgaagcttcccatctaagtgtgcatggagaagacattcttgaagaagcctttgctt 664
Query: 434 tcactaaggctttcttggaatcttctgcggttaagtcattccctaattttgcaaggcata 493
|||| |||| || ||| | || ||||| ||| ||| |||||||||| | ||||||||
Sbjct: 665 tcaccaaggattacttacagtcctctgcagttgagttattccctaatctcaaaaggcata 724
Query: 494 ttggtagtgcactagagcagccagtacacaaaggcataccaaggttagaggcaagaaaat 553
| | || ||||||||||| | |||| ||| | || ||| ||||||| || ||||
Sbjct: 725 taacgaacgccctagagcagcctttccacagtggcgtgccgaggctagaggccaggaaat 784
Query: 554 atatcgatttgtacgaggttgat---gaaagtcgaaatgaaactgtactagagcttgcaa 610
|||||| | ||||| | |||| ||| | || ||||||||| | || ||| ||||||
Sbjct: 785 tcatcgatctatacgaagctgatattgaatgccggaatgaaactctgctcgagtttgcaa 844
Query: 611 agttggattttaatagagtgcaattactacaccaagaagaattaagtcaattctcaaagt 670
||||||||| ||||||||| || ||| | |||||| |||| | | || ||||||||||
Sbjct: 845 agttggattataatagagttcagttattgcaccaacaagagctgtgccagttctcaaagt 904
Query: 671 ggtggaagaatttgaatattactaggcaggtttcttatgcaagaaatagaatggcggaaa 730
||||||| | ||||| || || | | || ||||||||||| | |||||||| || |
Sbjct: 905 ggtggaaagacctgaatcttgcttcggatattccttatgcaagagacagaatggcagaga 964
Query: 731 tcttcttttgggcggtttctatgtattctgagccgcaatatgcaaaggctagaatgatag 790
| ||||||||||| || | ||||| | |||||| | |||||| | | |||||||
Sbjct: 965 ttttcttttgggcagtcgcgatgtactttgagcctgactatgcacacacccgaatgatta 1024
Query: 791 tctcgaaagttgtatcacttatatcactaatagacgacacaattgatgcatatgcaacta 850
| |||| ||||||| ||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 1025 ttgcgaaggttgtattgcttatatcactaatagatgatacaattgatgcgtatgcaacaa 1084
Query: 851 ttgaagaaattcactgtcttgcttatgcaatcgaaaggtgggatatgagct 901
| || |||| ||| ||||||| | ||| ||| ||||||||| |||||||
Sbjct: 1085 tggaggaaactcatattcttgctgaagcagtcgcaaggtgggacatgagct 1135