Jatropha Genome Database

JcCB0376161.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0376161.10 + phase: 1 /pseudo/partial
         (542 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29776.m000489 UDP-glucose 4-epimerase, putative                       611   e-174

>29776.m000489 UDP-glucose 4-epimerase, putative
          Length = 1254

 Score =  611 bits (308), Expect = e-174
 Identities = 464/516 (89%)
 Strand = Plus / Plus

                                                                        
Query: 27   agatacttcaatgtgattggttcagatccagatggcagattaggtgaggctcctagacct 86
            |||||||||||||| ||||||||||||||||| |||||| | ||||||||||| ||||||
Sbjct: 736  agatacttcaatgtaattggttcagatccagaaggcagacttggtgaggctcccagacct 795

                                                                        
Query: 87   gaattgcgtgagcatggacgaatttctggtgcctgttttgatgctgctcgtggtattatt 146
            ||| |||| || |||||||| || |||||||| ||||||||||| |||||||| ||||||
Sbjct: 796  gaactgcgagaacatggacgtatatctggtgcttgttttgatgcagctcgtggcattatt 855

                                                                        
Query: 147  tctggtctgaaggttaaaggaacagattacaagacacatgatggtacttgtattcgagat 206
            ||||| |||||||||||||||||||| || |||||||||||||||||||||||| |||||
Sbjct: 856  tctgggctgaaggttaaaggaacagactataagacacatgatggtacttgtattagagat 915

                                                                        
Query: 207  tatattgatgttactgatcttgttgatgctcatgtgaaagctctagaaagggcattgcct 266
            ||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||
Sbjct: 916  tatattgatgttactgatcttgtcgatgctcatgtgaaagctcttgaaaaggcaatgcct 975

                                                                        
Query: 267  cgtaaagttggcatctacaatgtcggcactggaaaaggtagatctgtcaatgaatttgtg 326
             |||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 976  ggtaaagttggtatctacaatgttggtactggaaaaggtagatctgtcaatgaatttgtg 1035

                                                                        
Query: 327  gaggcatgcaagaaggcaaccggtgtaaacatcaaagtcgactatttacctcgcagacct 386
            |||||||| ||||||||||| |||||  |||||||||||||||||||||||||  |||||
Sbjct: 1036 gaggcatgtaagaaggcaactggtgtggacatcaaagtcgactatttacctcgtcgacct 1095

                                                                        
Query: 387  ggtgattatgccgaagtttttagtgacccaacaaaaattaggctggagttgaactggacc 446
            ||||| ||||| ||||||| ||||||||| || || || ||| | ||| |||||||||| 
Sbjct: 1096 ggtgactatgctgaagtttatagtgaccctactaagatcagggtcgagctgaactggaca 1155

                                                                        
Query: 447  gcacaacacactgatctccaggagagcttacagattgcatggagatggcaaaagtcgcat 506
            || |||||||| |||||||| |||||||||||| | |||||||||||||||||| | |||
Sbjct: 1156 gcgcaacacaccgatctccaagagagcttacaggtagcatggagatggcaaaaggcacat 1215

                                                
Query: 507  agaaacgggtatggatcacctctggtgatggcttct 542
             | |||||||||||||| ||||||||||||||||||
Sbjct: 1216 cggaacgggtatggatcccctctggtgatggcttct 1251