Jatropha Genome Database
- JcCB0375591.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0375591.10 + phase: 0 /pseudo
(1472 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003693 sucrose synthase, putative 1130 0.0
29986.m001646 sucrose synthase, putative 101 1e-20
29726.m004086 sucrose synthase, putative 60 4e-08
>29739.m003693 sucrose synthase, putative
Length = 2322
Score = 1130 bits (570), Expect = 0.0
Identities = 822/906 (90%)
Strand = Plus / Plus
Query: 1 atggctgaacgcgttatcactcgtgttcacagcatccgtgagcgcttggatgagacactt 60
||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 1 atggctgaacgtgttatcactcgcgttcacagcatccgtgaacgtttggatgagacactt 60
Query: 61 aaagctcaccgcaatgaaattgtggccttactttcaagaattgaagctaagggaaaagga 120
||| |||||||||| ||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 61 gctgctaaccgcaatgagattgtggccttacttacaagaattgaaggtaagggaaaagga 120
Query: 121 attcttcaacaccaccatatcattgctgagtttgaagcaattcctgaagagaacagaaag 180
|| |||||||||||||| ||||||||||| |||||||||||||||||||| | || |||
Sbjct: 121 atccttcaacaccaccagatcattgctgaatttgaagcaattcctgaagatattaggaag 180
Query: 181 atcctattggatggtgtatttggtgaagttctgagatctgcacaggaagcaattgttttg 240
| ||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||
Sbjct: 181 aatctattggatagtgtatttggtgaagtgttgagatcaacacaggaagcaattgttctg 240
Query: 241 cctccatgggttgcccttgctgtgcgcccaaggcctggtgtttgggagtacatcagagtg 300
||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct: 241 cctccttgggttgccctggctgtgcgcccaaggcctggtgtttgggaatatatcagagtg 300
Query: 301 aatgtccatgcacttgtcgttgaggagttgcgtgttgctgagtatcttcacttcaaggaa 360
||||||||||| ||||| ||||||||| |||||||||| ||||||||||| ||||||||
Sbjct: 301 aatgtccatgctcttgttgttgaggagctgcgtgttgccgagtatcttcatttcaaggag 360
Query: 361 gaacttgttgatggaagcaacaatggcaactttgtgcttgagttggactttgaaccattc 420
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaacttgttgatggaagccaaaatggcaactttgtgcttgagttggactttgaaccattt 420
Query: 421 aatgcatctttccctcgcccaactctttcaaagtacattggtaatggtgtggagttcctc 480
||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 421 aatgcatctttccctcgcccaacactttccaagtacattggtaatggtgttgagttcctc 480
Query: 481 aaccgtcacctttctgcaaaattgttccatgacaaggagagcttgcatcctctgcttgaa 540
|||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 481 aaccgtcacctttccgctaaattgttccatgacaaagagagcttgcatcctctgcttgaa 540
Query: 541 tttctcaaggtccactgccacaagggaaagaacatgatgcttaatgacagaattcaaaac 600
||||| ||||||||||||||||||||||||||||||||| | ||||||||||| || |||
Sbjct: 541 tttctgaaggtccactgccacaagggaaagaacatgatgttgaatgacagaatccagaac 600
Query: 601 ttgaattccttgcaatatgttctaaggaaggcagaggagtatctcacctcattgccatcc 660
||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |
Sbjct: 601 ttgaattccttgcaatatgttctgaggaaggcagaggagtatctcgttacattgccagct 660
Query: 661 gagactccttactctgagtttgagcacaagttccaggaaattggcctggaaagagggtgg 720
||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 661 aagactccatactccgagtttgagcacaaattccaagaaattggcctggagagagggtgg 720
Query: 721 ggtgatactgctgagcgtgttcttgagatgattagacttcttttggatcttcttgaggca 780
||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 721 ggtgacactgctgagcgcgttcttgagatgatccgacttcttttggatcttcttgaggca 780
Query: 781 ccagatccttgcacgcttgaaacattcttgggtagaatacctatggtcttcaacgttgtg 840
||||| || ||||| ||||| || ||| | || ||||| |||||||||||||| ||||||
Sbjct: 781 ccagacccctgcactcttgagaccttccttggcagaatccctatggtcttcaatgttgtg 840
Query: 841 attatgtctcctcatggttactttgcacaagacaatgttttggggtaccctgacactgga 900
|||||||||||||| || |||||||| |||||||||||| |||| || ||||| ||||||
Sbjct: 841 attatgtctcctcacggatactttgcccaagacaatgttctgggttatcctgatactgga 900
Query: 901 ggccag 906
||||||
Sbjct: 901 ggccag 906
Score = 577 bits (291), Expect = e-164
Identities = 414/455 (90%)
Strand = Plus / Plus
Query: 1006 actcgacttctccctgatgcagttggaaccacctgcggtcagcgcctggaaaaagtattt 1065
||||||||||| |||||||||||||||||||| ||||||||||| | || ||||| |||
Sbjct: 910 actcgacttcttcctgatgcagttggaaccacttgcggtcagcgtttagagaaagttttt 969
Query: 1066 ggaacagaacattcggatattcttcgtattccatttagaactgagaagggaattgtccgt 1125
|||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 970 ggaacagagcattcagatatccttcgaattccatttagaactgaaaagggaatcgtccgt 1029
Query: 1126 aaatggatctcccgatttgaagtgtggccctatctagagacttacactgaggatgttgcc 1185
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1030 aaatggatctcacgatttgaagtctggccctatctagagacttacactgaggatgttgcc 1089
Query: 1186 actgaaattggcaaagagcttcagggcaagcctgatttgatcattggaaactacagtgat 1245
||||||||||| || ||| |||| |||||||||||| ||||||||||||| |||||||||
Sbjct: 1090 actgaaattggtaaggagtttcaaggcaagcctgatctgatcattggaaattacagtgat 1149
Query: 1246 ggaaacattgttgcttccttgttagctcacaaattaggtgttacagagtgtacaattgct 1305
|||||||||||||| ||||||||||| |||||| | ||||||||||||||||| ||||||
Sbjct: 1150 ggaaacattgttgcctccttgttagcacacaaacttggtgttacagagtgtaccattgct 1209
Query: 1306 catgctctagaaaaaaccaaatatccagaatcagacatctactggaagaagtttgatgaa 1365
||||||||||| ||||| ||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 1210 catgctctagagaaaacaaaatacccggaatcagatatctactggaagaagttagatgac 1269
Query: 1366 aagtaccatttctcatgccagtttacagctgatctttttgccatgaatcatacagatttc 1425
|||||||| || || ||||||||||||||||||||| | |||||||| |||||||||||
Sbjct: 1270 aagtaccacttttcttgccagtttacagctgatcttatagccatgaaccatacagatttt 1329
Query: 1426 atcatcaccagtacattccaagaaattgctggaag 1460
|| ||||||||||||||||||||||||||||||||
Sbjct: 1330 attatcaccagtacattccaagaaattgctggaag 1364
>29986.m001646 sucrose synthase, putative
Length = 2328
Score = 101 bits (51), Expect = 1e-20
Identities = 192/239 (80%)
Strand = Plus / Plus
Query: 1216 cctgatttgatcattggaaactacagtgatggaaacattgttgcttccttgttagctcac 1275
|||||||| || || || |||||||||||||| ||| | |||||||| || || ||| |
Sbjct: 1114 cctgattttattatcgggaactacagtgatggcaacctcgttgcttctttattggcttat 1173
Query: 1276 aaattaggtgttacagagtgtacaattgctcatgctctagaaaaaaccaaatatccagaa 1335
||| | ||||| ||| |||| || ||||| |||||| | || |||||||||||||||||
Sbjct: 1174 aaaatgggtgtcacacagtgcaccattgcccatgctttggagaaaaccaaatatccagat 1233
Query: 1336 tcagacatctactggaagaagtttgatgaaaagtaccatttctcatgccagtttacagct 1395
||||| || || ||||| || |||||||| || || || |||||||| ||||| || |||
Sbjct: 1234 tcagatatatattggaaaaaatttgatgataaatatcacttctcatgtcagttcactgct 1293
Query: 1396 gatctttttgccatgaatcatacagatttcatcatcaccagtacattccaagaaattgc 1454
||| | || |||||||| || | ||||| ||||||||||| || | |||||| |||||
Sbjct: 1294 gatatcttagccatgaacaatgctgattttatcatcaccagcacttaccaagagattgc 1352
>29726.m004086 sucrose synthase, putative
Length = 2322
Score = 60.0 bits (30), Expect = 4e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 820 cctatggtcttcaacgttgtgattatgtctcctcatggttactttg 865
|||||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 808 cctatggtcttcaacgttgtcatcgtgtctcctcatggctactttg 853