Jatropha Genome Database

JcCB0375071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0375071.10 + phase: 2 /partial
         (337 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014078 similarity to nuclear protein zap, putative             385   e-106

>30147.m014078 similarity to nuclear protein zap, putative
          Length = 2031

 Score =  385 bits (194), Expect = e-106
 Identities = 242/258 (93%)
 Strand = Plus / Plus

                                                                        
Query: 56   gtggatgaccgcaatctgcgggtagctgattttgctcagttttgggcaattgcgaagaga 115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1204 gtggatgaccgcaatctgcgggtagctgattttgctcagttttgggcaattgcaaagaga 1263

                                                                        
Query: 116  tccggctatgaggtttacatatcagaagctacatataaagaccctgtgggctgtgcagct 175
            || |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1264 tctggctatgaagtttacatatcagaagctacatataaagaccctgcgggctgtgcagct 1323

                                                                        
Query: 176  aggaatgtacatggtttcactctagatgaaataaaaagcatggctgagcagtgggaggaa 235
            |||||||| |||||||| || ||||||||||||||||||||||||| ||||||||| |||
Sbjct: 1324 aggaatgtccatggttttaccctagatgaaataaaaagcatggctgggcagtgggaagaa 1383

                                                                        
Query: 236  gctccagtattgtacttgcaactggacatcaagtcattattccacggggatgacctgaag 295
            ||||||  ||| || ||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 1384 gctccaacattatatttgcaactggatatcaagtcgttattccatggggatgacctgaag 1443

                              
Query: 296  gaaagtggaattcaagag 313
            ||||||||||||||||||
Sbjct: 1444 gaaagtggaattcaagag 1461