Jatropha Genome Database

JcCB0374481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0374481.10 - phase: 0 /partial
         (438 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29907.m000629 conserved hypothetical protein                          559   e-159

>29907.m000629 conserved hypothetical protein
          Length = 621

 Score =  559 bits (282), Expect = e-159
 Identities = 399/438 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgaaagcaaaaggaaaaggtgctgatggttcttggctttggtgcactactgatgatact 60
           ||||||| |||||| ||| |||||||||| |||||||||||||| |||||||| || |||
Sbjct: 181 ttgaaaggaaaagggaaaagtgctgatggatcttggctttggtgtactactgaagacact 240

                                                                       
Query: 61  gtttatgatgctgtcaagtcgatgacacatcacaatgttggagccttggtggtcgtgaaa 120
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 241 gtttatgatgctgttaagtcgatgacccatcacaatgttggagccttggtggttgtgaaa 300

                                                                       
Query: 121 cctggagagcagaaatcacttgcaggaattatcacagagagagattacctgaggaaaatc 180
           ||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 301 cctggtgagcagaagtcaattgcaggaattatcacagagagagattacttgaggaagatc 360

                                                                       
Query: 181 attgtacaaggaagatcatccaagtcaactaaggttggggacatcatgactgaagagaac 240
           || ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 361 atagtacagggaagatcatccaagtcaactaaggttggggatattatgactgaagagaat 420

                                                                       
Query: 241 aagctcattacagtcactcccaacacaaaagttctgcaagcaatgcaattgatgacagat 300
           ||||| || |||||||||||  | || || ||||||| |||||||||| |||||||||||
Sbjct: 421 aagcttatcacagtcactcctgatactaaggttctgcgagcaatgcaactgatgacagat 480

                                                                       
Query: 301 aaccgcatcaggcacattcctgtgatcaatgacaaggaaatgattggcatggtgtccatt 360
           |||||||||||||||||||| || |||||||| ||||| ||| |||| ||| ||||||||
Sbjct: 481 aaccgcatcaggcacattccagtcatcaatgataaggacatggttggtatgttgtccatt 540

                                                                       
Query: 361 ggagatgttgtccgtgctgtggtggctgaacaccgggaggagctggaacgcctgaatgct 420
           ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 541 ggagatgttgtacgtgctgtggtggctgagcaccgggaggagttggaacgcctgaatgct 600

                             
Query: 421 tacatacaaggaggttat 438
           ||||||||||||||||||
Sbjct: 601 tacatacaaggaggttat 618