Jatropha Genome Database

JcCB0372411.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0372411.10 + phase: 0 /pseudo/partial
         (510 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002399 allantoinase, putative                                  519   e-147

>29851.m002399 allantoinase, putative
          Length = 1503

 Score =  519 bits (262), Expect = e-147
 Identities = 391/434 (90%)
 Strand = Plus / Plus

                                                                        
Query: 58   gagattcagcaagattctgagaactacacagaagatgctgaaaatgaccctcgacattat 117
            |||||||| ||||||||||||| ||||| |||||||| |    |||||||||||||||||
Sbjct: 679  gagattcaacaagattctgagagctacatagaagatggtatggatgaccctcgacattat 738

                                                                        
Query: 118  tcaacataccttaagacaaggccaccatcatgggaggaggcagctattagagacctagtg 177
            |||||||||||||||||||||||| ||||||||||||||||||||||||| || ||  | 
Sbjct: 739  tcaacataccttaagacaaggccagcatcatgggaggaggcagctattagggagcttcta 798

                                                                        
Query: 178  acactatcaaaggacacaaggattggtggtcctgctgaaggagctcatcttcacattgtt 237
            ||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 799  acagtatcaaaggacacaaggattggtggtcctgcagaaggatctcatcttcacattgtt 858

                                                                        
Query: 238  catttgtctgattcaggttcgtccctgcaacttataaagctagcaaaaagaagtggcgac 297
            |||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||| |||
Sbjct: 859  catttgtctgattcaggttcttccctacaacttttaaagcaagcaaaaagaagtggtgac 918

                                                                        
Query: 298  agtgtaactgttgagacgtgcccccattacctagccttttcagcagaagagattaaggat 357
            ||||| ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 919  agtgtgactgttgagacatgcccccattacttagccttttcagcagaagagattcaggat 978

                                                                        
Query: 358  ggagatacccgttttaaatgtgctccacccatccgtgattcagccaataaagaagcacta 417
            || ||||| ||||||||||||||||||||||| |||||| || |||||||||||||||||
Sbjct: 979  ggggatactcgttttaaatgtgctccacccattcgtgatgcaaccaataaagaagcacta 1038

                                                                        
Query: 418  tggaaggctttgttgggaggagatattgacatgttaagttctgatcattcaccaacagtc 477
            ||||||||| || ||  |||||| ||||||||||| ||||| ||||||||||| || || 
Sbjct: 1039 tggaaggctctgctgaaaggagacattgacatgttgagttccgatcattcacctacggtg 1098

                          
Query: 478  ccagagcttaaact 491
            ||||| || |||||
Sbjct: 1099 ccagaactcaaact 1112



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 1   ttttatgtgcccttcagggatcaatgactttcctatgaccaatgcccgtcatatcaag 58
           ||||||||| ||||||||||||||||||||||| |||||| |||||  ||||||||||
Sbjct: 570 ttttatgtgtccttcagggatcaatgactttccaatgaccgatgccactcatatcaag 627